| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,252,492 | G→A | 9.1% | intergenic (+22/+221) | ureG → / ← PP_2851 | urease accessory protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,252,492 | 0 | G | A | 9.1% | 181.8 / 6.8 | 66 | intergenic (+22/+221) | ureG/PP_2851 | urease accessory protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (32/28); new base A (3/3); total (35/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.35e-01 | |||||||||||
GGAGCGCGACACCCAGCGCATGCGGCCGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC > NC_002947/3252344‑3252639 | ggAGCGCGACACCCAGCGCATGCGGCCGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGATGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCggg > 8:277799/1‑149 (MQ=255) gAGCGCGACACCCAGCGCATGCGGCCGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCggg < 4:76078/148‑1 (MQ=255) gAGCGCGACACCCAGCGCATGCGGCCGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGc < 3:98665/149‑1 (MQ=255) cgACACCCAGCGCATGCGGCCACAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTc > 3:1065/1‑149 (MQ=255) ccAGCGCATGCGGCCGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGca > 4:171170/1‑147 (MQ=255) ccAGCGCATGCGGCCGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGACATGCCCGcaca < 2:216913/149‑1 (MQ=255) tGCGGCCGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGACATGCCCGCACAGAGTcctc < 7:289079/149‑3 (MQ=255) gCGGCCGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGcaca < 3:333363/140‑1 (MQ=255) gCGGCCGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGcaca > 4:333363/1‑140 (MQ=255) ggCCGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGGTGACA‑GATCGCGGACTCTGAGCGGGCATGTCCGCACAGAGCGCAAcgc > 4:122433/1‑149 (MQ=255) ggCCGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAAcgc > 5:213190/1‑149 (MQ=255) cGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGt > 6:345029/1‑149 (MQ=255) gCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGGGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGtg < 7:277799/149‑1 (MQ=255) cGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGtggctg > 6:221967/1‑149 (MQ=255) ggCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGtggctgg < 4:281899/149‑1 (MQ=255) ccTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGctc > 3:178949/1‑149 (MQ=255) cTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGcgc > 3:80788/1‑146 (MQ=255) cAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGctct < 4:213683/143‑1 (MQ=255) cAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGctct > 3:213683/1‑143 (MQ=255) cAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGgt > 1:380915/1‑149 (MQ=255) cAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGAGCGGGATGCTGCGGGTGCGAGGCTGACA‑GATCGAGGACTCTCTGAGTGCATGTCCTCACATAGACCAACGCGGTGGCTGGCACCGGCTATGCCgtt > 6:291718/1‑147 (MQ=255) aCCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGgtgt < 7:72048/149‑1 (MQ=255) gaagaaGGGCGAGGGGTTGCAGGCCTTGATCGATTTTATCGTCGAGCGAGGGATGCTGGGGGTGAGAGGCTGAAA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGAGGTGGCTGGCACCGGCTCAGCCGGTGTTagc > 8:307990/1‑149 (MQ=255) aagaagGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTcgc < 3:353026/148‑1 (MQ=255) aagaagGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTcgc > 4:353026/1‑148 (MQ=255) agaagGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCgg < 6:213190/149‑1 (MQ=255) gggCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGttt < 4:223620/149‑1 (MQ=255) ggCGTGGGGTTGCAGTCCGTGATCGTTTTTATCGTCGAGCGCGTGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGttt < 3:122433/148‑1 (MQ=255) gAGGGGTGGCAGGCCGTGATCGAGTTTATCGTCTAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGGCCGCACAGAGACCAACGCGGGGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTAccc < 8:169202/149‑1 (MQ=39) aGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAAAGCGGTGGCTGGCACCGGCTCTGCCGGTGTTAGCGGGTTTACCcg > 7:153703/1‑149 (MQ=255) gggTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCcgcg < 2:380915/149‑1 (MQ=255) gggTGGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCGCTGCCGGTGTTCGCGGGTTTACCcgcg < 5:221967/149‑1 (MQ=255) gTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGaa < 3:171170/149‑1 (MQ=255) gTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGaa > 8:218503/1‑149 (MQ=255) cAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACg < 5:374087/149‑1 (MQ=255) cAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTAAACCCGCGAacac < 4:1065/148‑1 (MQ=255) tCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTAc < 1:159839/128‑1 (MQ=255) tCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTAc > 2:159839/1‑128 (MQ=255) aTTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACAGGATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGc > 1:78662/1‑148 (MQ=255) aTTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGcaa > 3:310248/1‑149 (MQ=255) tATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAAt > 5:383075/1‑149 (MQ=255) tcgtcgAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATg > 1:65150/1‑148 (MQ=255) tcgAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAAcg > 2:67217/1‑149 (MQ=255) gctggATTCTGGGGTTGCGAGGCTGACT‑GATCGATGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGATGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGt < 5:291718/146‑1 (MQ=38) cTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTg > 1:201148/1‑149 (MQ=255) cTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTg < 2:78662/149‑1 (MQ=255) gggggTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGc < 4:178949/149‑1 (MQ=255) cGAGGCTGACA‑GATCGAGGACTCTGTGCGGGAATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGAGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAgg > 8:248108/1‑149 (MQ=255) aCA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGggccggc < 5:345029/147‑1 (MQ=255) aCA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCct > 2:184849/1‑149 (MQ=255) gATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCtt < 7:218503/149‑1 (MQ=255) cGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTcgc > 5:203339/1‑149 (MQ=255) aGGCCTCTGTGCGGGAATGTACTCACAGATACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCgg < 8:153703/149‑1 (MQ=37) aGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCgg < 2:65150/149‑1 (MQ=255) aGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCgg < 6:203339/149‑1 (MQ=255) aGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCAGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCgg > 6:370691/1‑149 (MQ=255) aGGACTCTGTGCGGGCATGTCCGCAAAGAGACAAACCCGGTGGCTGGCACAGGCTCTGCCGGTGTTCGCGGGTTTACACGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCgg > 6:53629/1‑149 (MQ=37) aGGACTCGGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCgg < 7:319256/149‑1 (MQ=255) aCTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGt > 4:16480/1‑148 (MQ=255) tgtgCGGACATGCCCGCACAGAGTACAACGCGGTGGCTGGCACCGGCAATGCCGGTGTTCGCGGGTTTACCCGCGAATACAGTAGCGGCCGCAACAATAAAAGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCAATTCGCGGGTAAAca > 7:239359/1‑148 (MQ=21) tgtgCGGACATGCCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCgg < 5:12715/142‑1 (MQ=255) tgtgCGGACATGCCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCgg > 6:12715/1‑142 (MQ=255) gtgCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCTGGCCTCTTCGCGGGTAAAccc > 7:224791/1‑149 (MQ=255) gtgCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAAccc > 1:71152/1‑149 (MQ=255) tgCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAAc < 1:67217/146‑1 (MQ=255) tgCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAAc < 6:383075/146‑1 (MQ=255) tgCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAAAGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCg > 5:373599/1‑149 (MQ=255) tgCGGACATGCCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCg > 6:2109/1‑149 (MQ=255) ggCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTcc < 2:201148/149‑1 (MQ=255) gCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGc < 1:322482/145‑1 (MQ=255) gCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGc > 2:322482/1‑145 (MQ=255) | GGAGCGCGACACCCAGCGCATGCGGCCGCAGCGGCCCTGGACCTTCAGCAACCTGAAGAAGGGCGAGGGGTTGCAGGCCGTGATCGATTTTATCGTCGAGCGCGGGATGCTGGGGGTGCGAGGCTGACA‑GATCGAGGACTCTGTGCGGGCATGTCCGCACAGAGACCAACGCGGTGGCTGGCACCGGCTCTGCCGGTGTTCGCGGGTTTACCCGCGAATACGGTAGCGGCCGCAACAATGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC > NC_002947/3252344‑3252639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |