Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,258,718 A→C 8.4% intergenic (‑40/+22) PP_2855 ← / ← PP_2856 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,258,7180AC 8.4% 243.4 / 9.0 80intergenic (‑40/+22)PP_2855/PP_2856hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (35/38);  new base C (3/4);  total (38/42)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

GATCGGTTTGAACACCACGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGTTGCAGTGTTGGT  >  NC_002947/3258571‑3258862
                                                                                                                                                   |                                                                                                                                                
gATCGGTTTGAACACCACGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGCAGAAAGGCCCCGCGaa                                                                                                                                                 <  4:141899/149‑1 (MQ=255)
   cGGTTTGAACACCACGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAggg                                                                                                                                              >  3:157941/1‑149 (MQ=255)
    ggTTTGAACACCACGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAggg                                                                                                                                              <  4:157941/148‑1 (MQ=255)
      tttGAACGCCACGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGc                                                                                                                                           <  8:338117/149‑1 (MQ=255)
          aaCACCACGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTc                                                                                                                                        >  8:320781/1‑148 (MQ=255)
          aaCACCACGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTc                                                                                                                                        >  3:72694/1‑148 (MQ=255)
           acacCACGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCTTCGGGGGGCCtttc                                                                                                                                      <  8:46204/149‑4 (MQ=255)
           acacCACGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCaa                                                                                                                                      <  4:247/149‑1 (MQ=255)
             accacGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCTTCGGGGGGCCtttctt                                                                                                                                    >  1:294327/1‑144 (MQ=255)
             accacGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCTTCGGGGGGCCtttctt                                                                                                                                    <  2:294327/149‑6 (MQ=255)
             accacGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGc                                                                                                                                    >  1:275790/1‑149 (MQ=255)
              ccacGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCaa                                                                                                                                      >  8:67245/1‑146 (MQ=255)
              ccacGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCaa                                                                                                                                      <  7:67245/146‑1 (MQ=255)
              ccacGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGca                                                                                                                                   >  5:300843/1‑149 (MQ=255)
               cacGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGca                                                                                                                                   >  8:213819/1‑148 (MQ=255)
               cacGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGca                                                                                                                                   >  8:311991/1‑148 (MQ=255)
                    ccccGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCgg                                                                                                                             >  6:352875/1‑149 (MQ=255)
                    ccccGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCgg                                                                                                                             >  4:116833/1‑149 (MQ=255)
                         cccgGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGa                                                                                                                        <  7:270788/149‑1 (MQ=255)
                          ccgGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGaa                                                                                                                       >  4:193654/1‑149 (MQ=255)
                          ccgGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGaa                                                                                                                       <  7:311991/149‑1 (MQ=255)
                            ggCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCTTCGGGGGGCCtttcttc                                                                                                                                   <  3:108728/135‑7 (MQ=255)
                            ggCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCTTCGGGGGGCCtttcttc                                                                                                                                   >  4:108728/1‑129 (MQ=255)
                                ggacggacAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCTTCGGGGGGCCtttc                                                                                                                                      <  6:252690/128‑4 (MQ=255)
                                ggacggacAGCGGCATTTGTGCAGCTTAGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCACCTTCGGGGGGCCtttc                                                                                                                                      >  5:252690/1‑125 (MQ=255)
                                    ggacAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTg                                                                                                             <  7:268135/149‑1 (MQ=255)
                                    ggacAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTg                                                                                                             <  7:320781/149‑1 (MQ=255)
                                      acAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTgg                                                                                                            <  7:361741/148‑1 (MQ=255)
                                      acAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGga                                                                                                           <  5:352875/149‑1 (MQ=255)
                                      acAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGga                                                                                                           <  1:164923/149‑1 (MQ=255)
                                              aTTTGTGCGGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGc                                                                                                     >  4:309063/1‑147 (MQ=255)
                                              aTTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGc                                                                                                     >  3:243062/1‑147 (MQ=255)
                                                  gtgCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGc                                                                                                 >  3:79754/1‑147 (MQ=255)
                                                    ctgacctCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGt                                                                                             <  7:66683/143‑1 (MQ=255)
                                                     cAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGtt                                                                                            >  7:255536/1‑149 (MQ=255)
                                                     cAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGtt                                                                                            <  8:30158/149‑1 (MQ=255)
                                                      aGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGttg                                                                                           <  5:261627/149‑1 (MQ=255)
                                                         ttCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCAGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGttgctt                                                                                        >  7:307595/1‑149 (MQ=255)
                                                            gCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGttgctttg                                                                                      <  7:343117/148‑1 (MQ=255)
                                                            gCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGGGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGttgctttg                                                                                      <  5:131915/148‑1 (MQ=255)
                                                             cTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGttgctttgct                                                                                    >  7:168759/1‑149 (MQ=255)
                                                              tCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTg                                                                                   >  7:10971/1‑149 (MQ=255)
                                                              tCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTg                                                                                   <  4:243062/149‑1 (MQ=255)
                                                                  gCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTg                                                                               <  8:307595/149‑1 (MQ=255)
                                                                             acaGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGgc                                                                    <  4:72694/149‑1 (MQ=255)
                                                                               aGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGgctg                                                                  >  5:356427/1‑149 (MQ=255)
                                                                                gCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCTACACCGgctgc                                                                 <  3:193654/149‑1 (MQ=255)
                                                                                 cAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATAGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGgctgc                                                                 >  5:252765/1‑148 (MQ=255)
                                                                                     aaCGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGt                                                            <  3:309063/149‑1 (MQ=255)
                                                                                      aCGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGtt                                                           <  4:67547/149‑1 (MQ=255)
                                                                                       cGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTc                                                          <  3:128322/149‑1 (MQ=255)
                                                                                              gCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCa                                                   <  6:356427/149‑1 (MQ=255)
                                                                                                    aTACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTAc                                             <  3:116833/149‑1 (MQ=255)
                                                                                                     tACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTAcc                                            <  6:300843/149‑1 (MQ=255)
                                                                                                        gCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCt                                         >  7:2290/1‑149 (MQ=255)
                                                                                                                 gATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGTTg                                        >  2:130776/1‑141 (MQ=255)
                                                                                                                 gATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCAc                                    >  6:278071/1‑145 (MQ=255)
                                                                                                                 gATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCAc                                    <  5:278071/145‑1 (MQ=255)
                                                                                                                      cTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGccc                                                    <  1:245430/124‑1 (MQ=255)
                                                                                                                      cTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGccc                                                    <  1:250833/124‑1 (MQ=255)
                                                                                                                      cTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGccc                                                    >  2:250833/1‑124 (MQ=255)
                                                                                                                      cTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGccc                                                    >  2:245430/1‑124 (MQ=255)
                                                                                                                         aCGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAAc                        >  4:243649/1‑149 (MQ=255)
                                                                                                                             tgtgtTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGaa                                                                                                                       <  6:171656/50‑1 (MQ=255)
                                                                                                                             tgtgtTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGaa                                                                                                                       >  5:171656/1‑50 (MQ=255)
                                                                                                                             tgtgtTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGc                     >  1:185417/1‑148 (MQ=255)
                                                                                                                               tgtTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTaa                  <  2:275790/149‑1 (MQ=255)
                                                                                                                                 ttGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGgc                                                                    >  7:26133/1‑97 (MQ=255)
                                                                                                                                 ttGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGgc                                                                    <  8:26133/97‑1 (MQ=255)
                                                                                                                                   gaagaaAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAggg               <  4:79754/148‑1 (MQ=255)
                                                                                                                                    aagaaAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGtt             >  6:326398/1‑149 (MQ=255)
                                                                                                                                    aagaaAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGtt             >  7:191130/1‑149 (MQ=255)
                                                                                                                                     agaaAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGTTg            <  8:255536/149‑1 (MQ=255)
                                                                                                                                       aaaGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACTGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGTTg            >  5:59174/1‑147 (MQ=255)
                                                                                                                                           gCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGTTg            <  8:271327/143‑1 (MQ=255)
                                                                                                                                           gCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGTTg            >  7:271327/1‑143 (MQ=255)
                                                                                                                                           gCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGTTGCAgtgt      >  8:18794/1‑149 (MQ=255)
                                                                                                                                            ccccccGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGTTGCAGTGtt     >  2:178490/1‑149 (MQ=255)
                                                                                                                                             cccccGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGTTGCAGTGTTg    <  7:18794/149‑1 (MQ=255)
                                                                                                                                             cccccGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATCGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGTTGCAGTGTTg    <  6:252765/149‑1 (MQ=255)
                                                                                                                                               cccGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGTTGCAGTGTTGGt  <  3:243649/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
GATCGGTTTGAACACCACGGCCCCGCCCGGCAGGACGGACAGCGGCATTTGTGCAGCTTCGCTCACGCTGGCCAGGCACAGCAAAAACGCCAAGGCGAAAATACGCATGATCGGATGCCTTACGGTGTGTTGAAGAAAGGCCCCCCGAAGGGGGCCTCAAGCACAGCGGTCAGAACGAAGTGTTGGAGATGGCCAGCGAGTTGCTTTGCTGGTTGCCCACACCGGCTGCTACGTTCACGCCCAGGTTACCGCTGCCACCGTTCACCGAACCGCTAAGGGTTGCAGTGTTGGT  >  NC_002947/3258571‑3258862

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑