New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5910975 = | 32 (1.230) | 3 (0.120) | 3/280 | 3.4 | 8.3% | coding (1183/1359 nt) | spuB | glutamylpolyamine synthetase |
? | NC_002947 | 5911007 = | 35 (1.400) | coding (1151/1359 nt) | spuB | glutamylpolyamine synthetase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CAGTGCAGGGCCGTGGCTACGAACGCCGCAACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5911010‑5910975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTTTGCGGGCCGGCATCCGGTACGC > NC_002947/5911007‑5911148 CAGTGCAGGGCCGTGGCTACGAACGCCGCAACCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGC > 6:77778/1‑148 GTGCAGGGCCGTGGCTACGAACGCCGCAACCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCG > 6:134334/1‑135 TGCAGGGCCGTGGCTACGAACGCCGCAACCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGG < 5:134334/135‑1 CTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTTTGCGGGCCGGCATCCGGTACGC > 1:56568/1‑146 CTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTTTGCGGGCCGGCATCCGGTACGC > 5:122368/1‑146 CAGTGCAGGGCCGTGGCTACGAACGCCGCAACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5911010‑5910975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTTTGCGGGCCGGCATCCGGTACGC > NC_002947/5911007‑5911148 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |