| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2957080 | 15 (0.580) | 7 (0.280) | 7/280 | 2.1 | 26.7% | intergenic (+35/‑161) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
| ? | NC_002947 | 2957165 = | 24 (0.960) | intergenic (+120/‑76) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein | |||||
GGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGT > NC_002947/2956936‑2957226 | ggaggaTCATGGCCCCGGCCTTGATCGCTAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCgg < 5:49369/148‑1 (MQ=255)ggATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCgg < 3:45309/148‑1 (MQ=255) gctgatCATGGCCCCGGCCTTGATCGACAACCACAGCGAGCTGGAGGAGGTGGTGGACAAGACCCGGATAGCCGTAGACCGCACGGAGCGGCTGGTCGGGAAGCAGTAAGCCGCTGCCAAGGGCAACGCGCTTCCCTGTGGGAGCgg > 7:11628/3‑147 (MQ=255) atgatCATGGCCCCGGCCGTGAGCGCCAACCACAGCGAGCTGGCTGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACTGCGCGGCTGGTCTGCAAGCTGTAATCAGCTGACAAGGGCAACGCGCTTCCCGGTGGGAGCGGGc < 2:57763/148‑1 (MQ=255) cGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGc < 3:67137/148‑1 (MQ=255) ccACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGc < 1:23926/148‑1 (MQ=255) gCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACCCCCCCCCACCCCCGCCCACCCCGTGCCAACCACCCGGTAGCCt > 2:75646/1‑147 (MQ=255) aCCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGtgcggcgtgcttgcggactgtgtggtacctgttacttgcgcaagaaggaccgccacgacggtcgt > 3:114592‑M1/1‑83 (MQ=255) gagagccTTAGACCGCACGGCGCGGCTTGTCGGCAAGCTGTAAGCCGCTGACAAGGGCACCGCGCTTCCCTGTGGGAGtgcggcgtgcttgcggactgtgtggtacctgttacttgcgcaagaaggaccgccacgacggtcgtttgga < 2:137411‑M1/145‑71 (MQ=255) gCACGGCGCGGCTGGTCGTCAAGGTGTAAGCCGCTGACAAGGTCAACGCGCTTCCCTGTGGGAGTGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAg < 6:7065/148‑1 (MQ=255) gCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGc > 5:65764/1‑148 (MQ=255) tGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGtgcggcgtgcttgcggactgtgtggtacctgttacttgcgcaagaaggaccgccacgacggtcgtttggagtacaaatgtacactctcgaattctg > 4:134725‑M1/1‑52 (MQ=255) tGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCtt > 2:44942/1‑148 (MQ=255) tCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGc < 8:51936/147‑1 (MQ=255) gggaaGCCGCGTACAAGGGCCACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCTGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtgtg < 7:107442/145‑1 (MQ=37) tAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGtgcggcgtgcttgcggactgtgtggtacctgttacttgcgcaagaaggaccgccacgacggtcgtttggagtacaaatgtacactctcgaattctggcaacaacgcgcct > 6:32743‑M1/1‑38 (MQ=255) aGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCCTCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCACCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTAc > 8:114595/1‑148 (MQ=255) gcgcTTCCCTGTGGGAGtgcggcgtgcttgcggactgtgtggtacctgttacttgcgcaagaaggaccgccacgacggtcgtttggagtacaaatgtacactctcgaattctggcaacaacgcgcctcggacctctaccttccggccc > 6:116973‑M1/1‑17 (MQ=255) gcgcTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaagaag < 1:82371/148‑1 (MQ=255) gcgcTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaagaa > 6:101688/1‑147 (MQ=255) ccTGTGGGAGtgcggcgtgcttgcggactgtgtggtacctgttacttgcgcaagaaggaccgccacgacggtcgtttggagtacaaatgtacactctcgaattctggcaacaacgcgcctcggacctctaccttccggcccatgca < 3:134725‑M1/146‑137 (MQ=255) tgGGAGtgcggcgtgcttgcggactgtgtggtacctgttacttgcgcaagaaggaccgccacgacggtcgtttggagtacaaatgtacactctcgaattctggcaacaacgcgcctcggacctctaccttccggcccatgcactgat > 4:33730‑M1/1‑6 (MQ=255) aGtgcggcgtgcttgcggactgtgtggtacctgttacttgcgcaagaaggaccgccacgacggtcgtttggagtacaaatgtacactctcgaattctggcaacaacgcgcctcggacctctaccttccggcccatgcactgatcgacg < 7:110532‑M1/148‑147 (MQ=255) | GGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGT > NC_002947/2956936‑2957226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |