New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6077844	18 (0.690)	3 (0.140)	3/242	3.0	17.1%	intergenic (‑146/+92)	PP_5329/PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter
	?	NC_002947	= 6077896	14 (0.650)					intergenic (‑198/+40)	PP_5329/PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGC  >  NC_002947/6077706‑6077971                                                                                                                                           |                                                                                                                                tCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACa                                                                                                                         <  7:102618/147‑1 (MQ=255)          gAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCCTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGc                                                                                                               <  3:12971/148‑1 (MQ=255)          gAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCACATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGc                                                                                                               <  3:8856/148‑1 (MQ=255)             tatTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGAAGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGcaca                                                                                                            <  8:75525/148‑1 (MQ=255)                                    gCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAAATGCAGGAAAGGCCCTCCCTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTAAAGGGGGGTTGCGCCGGCCGCACGGCCGCCCCCtcccc                                                                                     >  7:45054/1‑144 (MQ=255)                                      ccAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTg                                                                                   <  4:14652/148‑1 (MQ=255)                                         aGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAg                                                                                <  8:114357/148‑1 (MQ=255)                                             tCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGtt                                                                                                                  >  5:79499/1‑110 (MQ=255)                                              cGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGttt                                                                                                                 <  6:79499/110‑1 (MQ=255)                                              cGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCAATCACTGGAAGCAGGTCTTGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGc                                                                            <  4:2201/147‑1 (MQ=255)                                                gCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGc                                                                         <  8:99402/148‑1 (MQ=255)                                                    gCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTa                                                                     <  2:138575/148‑1 (MQ=255)                                                         aTGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGAGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCcgc                                                                >  5:98027/1‑148 (MQ=255)                                                                       aCTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGGTTGCACAGGCCTCAAGGCCGACACCTAAGCTGTAGGCGCGGCTTTAGCCGCGAAGAGGCCAGTAg                                                  >  6:96261/1‑148 (MQ=255)                                                                        cTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGGTTGCACAGGCCTCAAGGCCGCCACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGCGGCCAGTAGc                                                 >  3:87574/1‑148 (MQ=255)                                                                                tgACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCACTTAGCCGCAAAAACCCTTGCGAAAAGGGGGTTTCACACGCCCCAACCCCGCCCCCAAACCGTTATGAGCGGCTTTTTCCCCGAAACGGGCACTAGCCgccccg                                          >  2:67692/1‑142 (MQ=255)                                                                                  aCAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTGAAGGCCGACACCTAACCTGTAGGCGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAg                                       >  3:16357/1‑148 (MQ=255)                                                                                                                       gcttgttCGGGGCTAAAGCGGTTCCTACTGGGGGTTTGCACAGGCCTCAAGGCCGACACATAACCTTTAGGAGGGGTTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGc  <  2:33848/143‑1 (MQ=255)                                                                                                                                           |                                                                                                                                TCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGC  >  NC_002947/6077706‑6077971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.