New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4159083 =	12 (0.460)	3 (0.130)	3/258	3.2	18.9%	intergenic (+31/‑178)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	4159143 =	15 (0.650)					intergenic (+91/‑118)	PP_3661/PP_3662	membrane protein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCA  >  NC_002947/4159029‑4159287                                                                                                                   |                                                                                                                                                 ccgggccAGAAGCTGTTGGGCTGCCGGGAGCCCGAGGCGGCTGCTGCGCGGGTAAACCCGCTCCTACAGGGGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGttt                                                                                                                 <  5:5142/142‑1 (MQ=255)                    gCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACCGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGtt                                                                                               <  3:30580/147‑1 (MQ=255)                                    gTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGCTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCg                                                                              <  7:69252/148‑1 (MQ=255)                                             ttggcgGGTAAACCCGCTCCTAGAGGTGGGTGCTGCCCTGATGCCGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCTAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTAtggtg                                                                      <  6:78944/144‑1 (MQ=255)                                             ttCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTAtggtg                                                                      <  2:121639/147‑1 (MQ=255)                                              tCGCGGGTAAACCCGCTCCTACAGGTGGGGGCTGCCCGGACGCCGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCTGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATggtggt                                                                    <  1:131107/148‑1 (MQ=255)                                                            gCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATg                                                      >  1:147600/1‑148 (MQ=255)                                                                 tACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTa                                                 >  3:132843/1‑148 (MQ=255)                                                                      gtgggtgCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGc                                            >  5:68923/1‑148 (MQ=255)                                                                              tgcCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAgg                                       >  4:41415/1‑145 (MQ=255)                                                                              tgcCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGaaa                                    >  1:118522/1‑148 (MQ=255)                                                                                cccTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGa                                  >  4:11841/1‑148 (MQ=255)                                                                                 ccTGACGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGa                                  <  7:32579/147‑1 (MQ=255)                                                                                             aaGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCa                     >  5:60117/1‑148 (MQ=255)                                                                                             aaGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCACGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGGGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGAGGCCtaa                     >  8:125626/1‑146 (MQ=255)                                                                                                             cGGGTTCACCCGCGAAGCATGCAGCTCGGTCTCAAGGTGTTTCACCGCACCCCTCGTTGCCGTCCACATTTGTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCGGCACAGGAAAGACTTAGATGCCTCAACGCCCTGGCCTCAAt     >  6:104994/1‑148 (MQ=255)                                                                                                                gTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCCACGCCATGTCATCAATGCa  >  5:68594/1‑148 (MQ=255)                                                                                                                   |                                                                                                                                                 GGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCA  >  NC_002947/4159029‑4159287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.