| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 3,845,705 | +G | intergenic (‑72/+26) | PP_3394 ← / ← PP_3395 | 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,845,703 | 1 | . | G | 97.1% | 234.5 / 0.0 | 69 | intergenic (‑70/+28) | PP_3394/PP_3395 | 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base G (37/30); total (38/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
CTGCTGTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGC‑GG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAAT > NC_002947/3845558‑3845833 | ctgctgTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGC‑ggg < 2:28358/149‑2 (MQ=255) cttgcGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGC‑gggc < 7:314900/143‑3 (MQ=255) ctgTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGC‑gggct > 4:271092/1‑145 (MQ=255) ctgTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGC‑gggc < 8:34675/147‑3 (MQ=255) tCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGC‑gggctga < 5:367940/147‑6 (MQ=255) aTGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCg < 3:46734/149‑1 (MQ=255) gATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGt > 3:76750/1‑148 (MQ=255) aTCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGt > 3:113071/1‑147 (MQ=255) tCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAg > 6:137794/1‑149 (MQ=255) aCTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGcc < 3:375031/149‑1 (MQ=255) ttGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATcc < 4:119019/137‑1 (MQ=255) ttGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATcc > 3:119019/1‑137 (MQ=255) gCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGa > 7:135025/1‑149 (MQ=255) gCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGa > 2:26556/1‑149 (MQ=255) cAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGAt < 6:137964/149‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCACTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGa > 3:116355/1‑149 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAg > 7:127267/1‑149 (MQ=255) cAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCCGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGc < 6:342147/148‑1 (MQ=255) aGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAACCGTTGCGCCAGACTAAGAGCCTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGccc < 1:132411/149‑1 (MQ=255) cgcgCAGGCCGACTTCATTGATTGATATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCt > 7:273655/1‑149 (MQ=255) gcgcAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGAAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATAAGCCCGCGCCATg > 1:257289/1‑149 (MQ=255) cgcAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGc > 4:283908/1‑149 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATcc > 6:436250/1‑114 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATcc < 5:436250/114‑1 (MQ=255) cAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTCAAGCGTTGCCCCAGACTAAGAG‑CTGGATCACGGGCAGAAAACCCGTGTTTCGCGGG‑CTTATCCATCGTCAGCCACGATGTATCAGCCCGCGCCCTGCCa < 5:402813/149‑1 (MQ=255) aGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTAGCGCGAGACTAAGAG‑CTGTATGACGGGCAGAAAAGAAGTGTTTCGC‑GGTCATATCAATCGTCAGACACGATGGATCAGCCCGCGCACTGCCAg > 3:377932/1‑149 (MQ=255) gCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCATAAAAGACGTGTTTCGCGGG‑CTTATCCATCGTCAGCCACGATGTATCAGCCCGCGCCCTGCCAGGc < 2:132504/149‑1 (MQ=255) aCTTCATTCTTTGTTTTTG‑TGTGACTCGCGGTCGCCCTGTCTCACGCGTTGCGCCACACTAACAC‑CTGCATGAGGGGCTTAAACCCCGTGTTTCGCGGG‑CTGATCCATCGCCCCCCACGTTGTATCAGCCCGCGCCCTGCCAGGCCGGt < 4:76750/149‑1 (MQ=255) tCATTGTTTGTTTTTTTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCTTTGCGCCATACTAAGAG‑CTGTATTACGGGTACAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGTATCAGCCCGCGCCCTGCCAGGCCGGTGc < 8:115874/148‑1 (MQ=255) cATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGTAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGc > 7:115874/1‑147 (MQ=255) cATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATg < 2:60097/118‑1 (MQ=255) cATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCAGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATg > 1:60097/1‑118 (MQ=255) ttattgttGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGCTCCATAGTCAGCCACGATGGATACGCCCGCGCCCTGCCAGGCCGGTGCCCGCAGCaa > 2:150468/1‑147 (MQ=255) tgttgtCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATc < 2:56732/92‑1 (MQ=255) tgttgtCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATc > 1:56732/1‑92 (MQ=255) gttgtCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAggtgg > 3:343059/1‑149 (MQ=255) gttgtCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAggtg < 1:26556/148‑1 (MQ=255) gttgtCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATACATCGTCAGCCACGATGGATAAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAggtgg > 2:88768/1‑149 (MQ=255) gtCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTc > 2:324897/1‑148 (MQ=255) tCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCcgcg < 8:91347/112‑1 (MQ=255) a‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATc > 3:285153/1‑102 (MQ=255) a‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATc < 4:285153/102‑1 (MQ=255) tCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATACATCGTCAGCCACGATGGATCAGCCCGCGCCCTTCCAGGCCGGTGCCCGCAGCAACCGGTGGTCAAg > 5:270030/1‑147 (MQ=255) cgcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAg > 1:336480/1‑149 (MQ=255) cgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGgc > 7:188872/1‑149 (MQ=255) tctctcTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgcc > 3:149401/1‑149 (MQ=255) tctgtctgAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagc > 2:304080/1‑149 (MQ=255) tgtctgAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAggtg > 8:114811/1‑129 (MQ=255) tgtctgAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAggtg < 7:114811/129‑1 (MQ=255) gtctgAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagccga > 3:59813/1‑149 (MQ=255) tgAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACg > 1:401650/1‑113 (MQ=255) tgAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCCACAGGTGGTCAAGCAGGCGCCGAGCCGACAg > 3:269568/1‑149 (MQ=255) tgAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCaa > 7:9471/1‑130 (MQ=255) gAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGc > 2:73676/1‑149 (MQ=255) gtggcgcCATACAAAGAC‑CTGTAGCACGGGCAGAAACGACGTGTTTCGC‑GGCCTGACCCATCGCCAGCCACGATGTATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGagag < 3:271092/146‑1 (MQ=255) ttGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGc < 4:343059/149‑1 (MQ=255) cgcCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑GTTATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGGCGAGCCGACAGCGAGAGCgt < 8:104558/148‑1 (MQ=255) cataCTAAGAG‑CTGGAGGCGGGGCCTAAAACCCGTGTTTCGCGGG‑CTGAGCCATCGTCAGCCACGTTGTTTCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGc < 4:113071/146‑1 (MQ=255) cTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt < 1:73676/149‑1 (MQ=255) tAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 6:11833/1‑149 (MQ=255) agag‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGTATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTcgc < 8:135025/149‑1 (MQ=255) agag‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:92388/1‑128 (MQ=255) agag‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa < 2:92388/128‑1 (MQ=255) gag‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTcgcg > 7:384285/1‑149 (MQ=255) agcgcgggATCACGGGCAGAAACCACGTGTTGCGCGGG‑CTCACCCATCGCCACCCACTAGGTACCAGCCCGCGCCCTCCCAGGCCGGGGCACGCAGCAACAGGGGGTCAACAAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTcgc < 1:304080/143‑1 (MQ=255) ag‑CTGGATGACGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTcgcg > 1:165089/1‑148 (MQ=255) cGGGCAGAAAAGCCGTGTTTCGCGGG‑CTGATCCATCGTCCCCCACGATGTATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGa < 4:377932/149‑1 (MQ=255) cGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGa < 3:283908/149‑1 (MQ=255) cGGGCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGa < 2:336480/149‑1 (MQ=255) gggCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCGGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGAc > 3:115515/1‑149 (MQ=255) gggCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGCCAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGAc > 1:390452/1‑149 (MQ=255) gggCAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGAc < 8:127267/149‑1 (MQ=255) cAGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGaa < 1:324897/149‑1 (MQ=255) aGAAAAGACGTGTTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAAt < 4:59813/149‑1 (MQ=255) | CTGCTGTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCA‑TCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAG‑CTGGATGACGGGCAGAAAAGACGTGTTTCGC‑GG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAAT > NC_002947/3845558‑3845833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |