| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 307,866 | +C | intergenic (+881/‑988) | hslO → / → PP_0254 | molecular chaperone HslO/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 307,865 | 1 | . | C | 98.5% | 233.1 / ‑4.0 | 68 | intergenic (+880/‑989) | hslO/PP_0254 | molecular chaperone HslO/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (37/30); total (37/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAG‑CGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAGTA > NC_002947/307737‑308006 | gAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTgac > 6:188252/1‑148 (MQ=255) aaCTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTgacg‑a > 7:181590/1‑149 (MQ=255) ctgccggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACgg < 5:65842/149‑1 (MQ=255) tgccggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGt > 4:146973/1‑149 (MQ=255) tgccggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCATGGAGGGCCTGTCCGGCGGACTGGCAAGACAACCATTTCGGGTGACG‑AAAGCCGTTACCTGATGGGTGAcg‑acgacc > 1:138483/1‑147 (MQ=255) gctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTgggg < 4:283472/149‑1 (MQ=255) gctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTgggg > 2:169093/1‑149 (MQ=255) ctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGc < 4:405226/149‑1 (MQ=255) tgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGc > 1:199039/1‑148 (MQ=255) ccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCg > 5:246911/1‑147 (MQ=255) aCTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTg > 4:437520/1‑149 (MQ=255) aCTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTg > 4:322289/1‑149 (MQ=255) gCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCt > 2:441855/1‑149 (MQ=255) ccTATGCACTGCGCGGCCAACATCGGCGATAGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCt > 1:260258/1‑149 (MQ=255) ccTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCtt < 8:181590/149‑1 (MQ=255) cTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTTCCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCtt > 1:142081/1‑148 (MQ=255) tGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCaa < 1:169093/148‑1 (MQ=255) aCTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATg < 3:144698/149‑1 (MQ=255) aCTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATg > 5:47206/1‑149 (MQ=255) cTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATgg < 3:50854/149‑1 (MQ=255) cgGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAggc > 7:339156/1‑149 (MQ=255) ggCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAggcg > 2:328871/1‑149 (MQ=255) gCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAggcgg > 5:452411/1‑149 (MQ=255) cAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCaa > 4:149503/1‑135 (MQ=255) cAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCaa < 3:149503/135‑1 (MQ=255) aCATCGGCGT‑ATAAGGCGATGTGTACTTGTTCTT‑‑‑GGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGTCGTAATC‑CGTTACCTTTTCGGTTAAGTACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGgctg < 1:328871/149‑1 (MQ=255) ggCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTa < 6:261661/146‑1 (MQ=255) ggCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTa > 5:261661/1‑146 (MQ=255) ga‑agaaGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCaa < 6:452411/149‑1 (MQ=255) a‑agaacGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAg < 2:196170/149‑1 (MQ=255) agaagGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCaa < 3:188967/147‑1 (MQ=255) agaagGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCaa > 4:188967/1‑147 (MQ=255) agaagGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGt < 6:246911/149‑1 (MQ=255) agaagGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGt < 6:241064/149‑1 (MQ=255) agaagGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGt < 8:339156/149‑1 (MQ=255) ggCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACTAGCACGCTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCAt > 3:270969/1‑149 (MQ=255) ggCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCAt > 6:209313/1‑149 (MQ=255) ggCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCAt > 2:367138/1‑149 (MQ=255) ggCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTAAACATGGAAGTCGGCTGCTACGCCAAGTGCAt > 3:265591/1‑149 (MQ=255) ttaCCTTGTTCTT‑‑‑GGGCATGTCCGGC‑‑AGTGGCAAGAGTACCCTTTCGGCTTACT‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCAGGGTTGGGGGTAAGGCGTTGTATTCAACATGTAAGGCGGCTGCTACGCCATGTGCATCGACCt < 2:142081/146‑1 (MQ=255) tgACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCt < 5:188252/148‑1 (MQ=255) gACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGa > 4:311243/1‑144 (MQ=255) gACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGa < 3:311243/144‑1 (MQ=255) aCCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTc > 1:146099/1‑149 (MQ=255) cTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGt < 6:314659/134‑1 (MQ=255) cTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGt > 5:314659/1‑134 (MQ=255) gTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCgag < 3:437520/148‑1 (MQ=255) cat‑‑‑cGGGCCGTCCGGC‑‑ACTGGCAATACTACCCTTTCGGCCGCCG‑AAAGCCGTTACCTTCTCGGTGACG‑CACCGCCAGGTTGGGGCGAATGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGagaag < 4:36518/146‑1 (MQ=255) tt‑‑‑cGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAgaagaa > 8:149811/1‑149 (MQ=255) tCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGt > 1:17649/1‑149 (MQ=255) ggC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGgctgc > 4:402534/1‑105 (MQ=255) ggC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGgctgc < 3:402534/105‑1 (MQ=255) c‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCt < 2:199039/149‑1 (MQ=255) aCTGGCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTg < 2:138483/149‑1 (MQ=255) gCAAGACTACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGa > 1:31098/1‑147 (MQ=255) tACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCtt > 5:352601/1‑72 (MQ=255) tACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCtt < 6:352601/72‑1 (MQ=255) tACCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTTCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCa < 1:441855/149‑1 (MQ=255) aCCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTAc > 2:447243/1‑93 (MQ=255) aCCCTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTAc < 1:447243/93‑1 (MQ=255) cccTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAg > 3:384348/1‑149 (MQ=255) ccTTTCGGCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCCAGTGCATCGAACTGTCCGAGAATAACGAGCCGGTCATCTGGACAGCCATCAAg > 3:30648/1‑148 (MQ=255) gCTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGgcgc < 3:146973/149‑1 (MQ=255) cTGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCa < 6:47206/149‑1 (MQ=255) tGACG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAg > 1:374577/1‑149 (MQ=255) aCG‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAGTa > 3:82759/1‑149 (MQ=255) g‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCg < 5:300208/100‑1 (MQ=255) g‑AAAGCCGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCg > 6:300208/1‑100 (MQ=255) | GAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGA‑AGAAGGCGATGTGACCTTGTTCTT‑‑‑CGGCCTGTCCGGC‑‑ACTGGCAAGACTACCCTTTCGGCTGACG‑AAAG‑CGTTACCTGATCGGTGACG‑ACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAGTA > NC_002947/307737‑308006 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |