Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	196,390	0	T	C	23.1%	158.6 / 50.7	93	D632D (GAT→GAC)	PP_0168	putative surface adhesion protein
Reads supporting (aligned to +/- strand):  ref base T (35/35);  new base C (10/11);  total (47/46)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.09e-01
Rejected as consensus: Frequency below/above cutoff threshold.

TGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACC  >  NC_002947/196245‑196537                                                                                                                                                   |                                                                                                                                                    tGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCATGCCCAGACGCCGGTGACACTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTc                                                                                                                                                  >  7:290140/1‑149 (MQ=21)  gACGGCGAGCCCGTCGGTGACCGAAGGGGGCGTGTTCACTTACACCGGGACCCTTTCCAATCCAGCCCAGACGGCGGTGACAGTGTCCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTc                                                                                                                                                  <  4:401481/148‑1 (MQ=11)  gACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAACCCGCCAAAACCCAGGCCCGCGTCGTTTTc                                                                                                                                                  >  3:401481/1‑148 (MQ=11)   aCGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCa                                                                                                                                                <  5:239103/149‑1 (MQ=255)   aCGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCa                                                                                                                                                <  8:101105/149‑1 (MQ=255)        gAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGAacc                                                                                                                                           >  3:291290/1‑149 (MQ=21)              gTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCg                                                                                                                                      >  7:13122/1‑148 (MQ=34)              gTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCg                                                                                                                                      >  7:354178/1‑148 (MQ=34)                 ggTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAAt                                                                                                                                   >  6:143527/1‑148 (MQ=34)                 ggTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAAt                                                                                                                                   <  8:303735/148‑1 (MQ=34)                  gTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGa                                                                                                                                 >  4:87928/1‑149 (MQ=34)                  gTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGa                                                                                                                                 >  8:269336/1‑149 (MQ=255)                      ccGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTc                                                                                                                             >  4:336439/1‑149 (MQ=255)                       cGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCACCCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGACGGCAAAACCCAGGGCAGCGTCGACGTCCAGCCCCCGGCGAATGACGTCt                                                                                                                            >  1:25111/1‑149 (MQ=11)                       cGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGGCGAGTTCCAGACCCCGGCGAATGACGTc                                                                                                                             >  7:384855/1‑148 (MQ=21)                       cGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCt                                                                                                                            <  1:124334/149‑1 (MQ=255)                        gAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACTCCGGTGACCGTGACCCTGT‑CAAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTa                                                                                                                           <  8:191574/149‑1 (MQ=11)                         aaGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTa                                                                                                                           >  4:413269/1‑148 (MQ=255)                          aGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTaca                                                                                                                         <  6:49278/149‑1 (MQ=255)                               gcgTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACaacaac                                                                                                                    <  8:257888/149‑1 (MQ=34)                               gcgTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACaacaac                                                                                                                    <  8:354178/149‑1 (MQ=34)                                cgTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACg                                                                                                                   <  3:413269/149‑1 (MQ=255)                                    aTCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGtt                                                                                                                <  5:160101/148‑1 (MQ=34)                                    aTCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTa                                                                                                                           <  8:416905/137‑1 (MQ=255)                                    aTCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTa                                                                                                                           >  7:416905/1‑137 (MQ=255)                                    aTCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCACGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGGCTACAACCACGGTTc                                                                                                               >  5:447814/1‑149 (MQ=11)                                    aTCACTTACACCGTGACACTGAGCAATCCTCCCCAGACGACGGTGACAGTGACCCTGT‑ACAACTGCCAAACCATTACCGTTGAACACGGCAAAAACAAGGCCAGCGTCGATTTCCAGACACAGGCTAATGAAGTCTaccacacccgtac                                                                                                               >  8:178834/1‑142 (MQ=11)                                       aCTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGa                                                                                                                                     <  5:420828/124‑1 (MQ=255)                                       aCTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGa                                                                                                                                     >  6:420828/1‑124 (MQ=255)                                        cTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACt                                                                                                           >  7:246688/1‑149 (MQ=255)                                        cTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACt                                                                                                           <  3:148402/149‑1 (MQ=255)                                            cacCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTc                                                                                                        <  8:290140/148‑1 (MQ=34)                                             acCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAg                                                                                                      >  5:37111/1‑149 (MQ=34)                                              ccGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAgt                                                                                                     <  5:143527/149‑1 (MQ=35)                                              ccGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAAACATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAgt                                                                                                     <  7:194089/149‑1 (MQ=25)                                               cGTGACCCTGAGCAATCCTGCCCAGACGGCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGTCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAgtg                                                                                                    <  3:77090/149‑1 (MQ=25)                                                   aCCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCAc                                                                                                >  4:86396/1‑149 (MQ=37)                                                      cTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCAt                                                                                             >  4:364489/1‑149 (MQ=17)                                                         aGCAATCCTGCCCAGACGCCAGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATc                                                                                            >  4:309041/1‑147 (MQ=37)                                                          gCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGT‑CCAACGGCCAAACGATTACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCgag                                                                                         <  5:182250/149‑1 (MQ=255)                                                              tCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACg                                                                                     >  5:34009/1‑149 (MQ=37)                                                              tCCTGCCCACACCCCGGAGACAGTGACCCAGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGCCAGCGTCGAATTCCAGACCACGGCGAATGACGTCAACAACAACGGTTCGCCTGTCAGTATCACCAAAGAGAACg                                                                                     >  8:337471/1‑149 (MQ=11)                                                                 tGCCCAGACGCCGGTGACAGTGACCCTGTGCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGCCCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGc                                                                                    >  1:259141/1‑148 (MQ=255)                                                                   cccAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCAcc                                                                                >  6:347851/1‑149 (MQ=38)                                                                    ccAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACcg                                                                               >  3:17405/1‑149 (MQ=38)                                                                       gACGCCGGTGACAGTTACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCTGCAAAACACAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACcggcg                                                                            <  7:155029/149‑1 (MQ=255)                                                                        aCGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACcggcgg                                                                           >  1:364459/1‑149 (MQ=39)                                                                              gTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAAttt                                                                     <  6:37111/149‑1 (MQ=39)                                                                                  cAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGa                                                                  <  3:309041/148‑1 (MQ=38)                                                                                   aGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAg                                                                 >  5:253446/1‑148 (MQ=38)                                                                                        cccTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAAc                                                                                      >  5:271926/1‑122 (MQ=35)                                                                                        cccTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAAc                                                                                      <  6:271926/122‑1 (MQ=35)                                                                                         ccTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGtt                                                                                                                <  4:396300/95‑1 (MQ=16)                                                                                         ccTGT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGtt                                                                                                                >  3:396300/1‑95 (MQ=16)                                                                                         ccTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGa                                                          >  5:73930/1‑149 (MQ=37)                                                                                            gT‑CCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGt                                                                                                         <  2:401792/99‑1 (MQ=16)                                                                                                cAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCg                                                     >  3:110789/1‑148 (MQ=37)                                                                                                 aaCGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTAAAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGa                                                    >  4:239348/1‑148 (MQ=37)                                                                                                  aCGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTa                                                                                                                           >  3:223888/1‑76 (MQ=255)                                                                                                  aCGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTa                                                                                                                           <  4:223888/76‑1 (MQ=255)                                                                                                   cGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATc                                                 <  6:34009/149‑1 (MQ=38)                                                                                                        aaaCCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACg                                            >  1:174286/1‑149 (MQ=39)                                                                                                        aaaCCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACg                                            >  3:339151/1‑149 (MQ=39)                                                                                                          aCCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCAc                                                                                 <  5:39656/110‑1 (MQ=35)                                                                                                          aCCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCAc                                                                                 >  6:39656/1‑110 (MQ=35)                                                                                                             aTTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGc                                       >  3:418284/1‑149 (MQ=39)                                                                                                                aCCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAg                                                                 >  3:368416/1‑120 (MQ=39)                                                                                                                aCCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAg                                                                 <  4:368416/120‑1 (MQ=39)                                                                                                                 ccGTTGAAGCCGTCAAAACCCAGGGCAGAGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCAACCGGTGGTAATTTCGTGCAACTGATCCCGAATCCGACGACGGCTCAg                                   <  7:178834/149‑1 (MQ=14)                                                                                                                   gTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGAc                                 >  4:351055/1‑149 (MQ=39)                                                                                                                      gAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCAc                              >  3:160789/1‑149 (MQ=39)                                                                                                                        aGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACg                             <  3:364489/148‑1 (MQ=21)                                                                                                                        aGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGa                            <  3:239348/149‑1 (MQ=39)                                                                                                                        aGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGa                            <  5:347851/149‑1 (MQ=39)                                                                                                                         gCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGAt                           >  1:79127/1‑149 (MQ=39)                                                                                                                         gCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGAt                           >  7:236474/1‑149 (MQ=39)                                                                                                                          ccGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGCATCCg                                               >  4:227614/1‑128 (MQ=38)                                                                                                                          ccGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCg                                               <  3:227614/128‑1 (MQ=38)                                                                                                                             gCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAAc                       <  2:259141/149‑1 (MQ=39)                                                                                                                               aaaaCCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGa                     <  8:13122/149‑1 (MQ=39)                                                                                                                               aaaaCCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCAAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACg                      >  3:322521/1‑148 (MQ=255)                                                                                                                                  aCCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTc                  <  6:253446/149‑1 (MQ=39)                                                                                                                                    ccAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCgg                >  4:393497/1‑149 (MQ=39)                                                                                                                                     cAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGt               <  3:87928/149‑1 (MQ=39)                                                                                                                                     cAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGt               <  2:364459/149‑1 (MQ=39)                                                                                                                                      aGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGa                                                                  <  3:423193/97‑1 (MQ=18)                                                                                                                                         gCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGAt           <  4:339151/149‑1 (MQ=39)                                                                                                                                          cAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCGACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATg          <  3:390365/149‑1 (MQ=255)                                                                                                                                           aGCGTCGATTTCCAGACCCCGTCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGc         <  5:341636/149‑1 (MQ=255)                                                                                                                                             cGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGcca       <  3:351055/149‑1 (MQ=39)                                                                                                                                              gTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCTGTGTCACCATCGAGAACGCCACCGGCGTTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGccac      <  6:73930/149‑1 (MQ=255)                                                                                                                                              gTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGccac      >  4:157676/1‑149 (MQ=39)                                                                                                                                                  aTTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCaccacc  <  4:17405/149‑1 (MQ=39)                                                                                                                                                   |                                                                                                                                                    TGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT‑CCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACC  >  NC_002947/196245‑196537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑