Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,460,226 Δ1 bp 8.6% coding (136/1446 nt) PP_3075 ← transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,460,2260T. 8.6% 181.6 / 10.4 58coding (136/1446 nt)PP_3075transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (26/27);  new base . (2/3);  total (28/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ATCAGGCTGCCGGGGATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGAAAACTCATCGTCGGGGGTC  >  NC_002947/3460078‑3460372
                                                                                                                                                    |                                                                                                                                                   
aTCAGGCTGCCGGGGATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCgat                                                                                                                                                     <  2:23430/149‑1 (MQ=255)
   aGGCTGCCGGGGATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCgatgat                                                                                                                                                  >  1:30148/1‑149 (MQ=255)
      cTGCCGGGGATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGAtc‑tc                                                                                                                                              <  7:337814/149‑1 (MQ=255)
         ccGGGGATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTCCGATGATC‑TCGaa                                                                                                                                           <  2:88288/149‑1 (MQ=255)
           ggggATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGaa                                                                                                                                           >  2:123003/1‑147 (MQ=255)
             ggATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACagc                                                                                                                                       <  5:293293/149‑1 (MQ=255)
             ggATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGA‑GATCATCGAACagt                                                                                                                                       <  6:254480/149‑2 (MQ=255)
              gATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACagc                                                                                                                                       >  1:242722/1‑148 (MQ=255)
                    tGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGCACAGCGAGCGGa                                                                                                                                >  8:152810/1‑149 (MQ=255)
                     gTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGA‑GATCATCGAACagtcca                                                                                                                                    >  6:290755/1‑140 (MQ=255)
                     gTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGA‑GATCATCGAACagtcca                                                                                                                                    <  5:290755/144‑5 (MQ=255)
                      tttCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATc                                                                                                                              <  2:100450/149‑1 (MQ=255)
                        tCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCg                                                                                                                             <  2:145037/148‑1 (MQ=255)
                          gCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCa                                                                                                                          <  1:89184/149‑1 (MQ=255)
                                      gATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTAATCCAGACGATGCGTGCCTGGCGGTCGACGTTCACCGTGCCCTCGATGGACTGTTCGATGATC‑TCGAACATCGAGCGGATCGCCAGTTGCCGTAcat                                                                                                              >  6:307526/1‑147 (MQ=255)
                                        tGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTgg                                                                                                            <  6:321674/149‑1 (MQ=255)
                                          gCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTgggg                                                                                                          <  1:123003/149‑1 (MQ=255)
                                           cACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTggggg                                                                                                         <  2:30148/149‑1 (MQ=255)
                                            aCTGGCAGCGTCGGCCAGGCCAAAGCGTCGGTCGTAGCGTTCGTTCATCCAGAAGATGCGTGCCTGGCGGTCGCAGATCACCGTGCCCTCGCTGGACTGTTCGATGATA‑TCCACCAGCGAGCGGATAGCCAGTTGc                                                                                                                     >  4:132716/1‑136 (MQ=255)
                                            aCTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCGGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGc                                                                                                                     <  3:132716/136‑1 (MQ=255)
                                             cTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTa                                                                                                       <  4:70528/149‑1 (MQ=255)
                                                 cAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTTCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTcc                                                                                                   >  4:80749/1‑149 (MQ=255)
                                                                caAAGCGTCGGGCGTAGCGTTCGTTCATCCAGAAGATGCGTGCCTGGCGGTAGACGATCACCGTGCACTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGgctgtcgctg                                                                                    >  1:55967/1‑149 (MQ=255)
                                                                      gTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTg                                                                               >  2:329348/1‑148 (MQ=255)
                                                                          ggCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATgg                                                                          <  1:45761/149‑1 (MQ=255)
                                                                          ggCGTAGCGTTCGGTCATCCAGACGATGCGTGCCTGGCGGTCGACGAGCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATgg                                                                          <  4:304340/149‑1 (MQ=255)
                                                                          ggCGTAGCGATCGTTAATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTAGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGATGCCGAACCTCGGGGTAGTCCATGAGCATGTCGCTGACGTGCATgg                                                                          >  4:138437/1‑149 (MQ=255)
                                                                             gTAGCGTTCGTTCTTCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGt                                                                        >  8:50781/1‑148 (MQ=255)
                                                                              tAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTg                                                                       >  1:373971/1‑148 (MQ=255)
                                                                                gCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAAc                                                                    <  2:198108/149‑1 (MQ=255)
                                                                                      gttcATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAAc                                                                    >  2:192781/1‑143 (MQ=255)
                                                                                      gttcATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAAc                                                                    <  1:192781/143‑1 (MQ=255)
                                                                                      gttcATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCt                                                               <  1:329348/148‑1 (MQ=255)
                                                                                      gttcATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCt                                                               >  2:38003/1‑148 (MQ=255)
                                                                                           tCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGTTCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCa                                                         >  1:119409/1‑149 (MQ=255)
                                                                                           tCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCa                                                         >  3:42066/1‑149 (MQ=255)
                                                                                           tCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCa                                                         >  2:14772/1‑149 (MQ=255)
                                                                                               gACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTa                                                     >  4:55165/1‑149 (MQ=255)
                                                                                                 cGATGCGTGCGTTGCTGTCGACGATGACCGTGCGCTCTCTGGACTGTTGGATGATC‑TATAACAGCGAGCTTATCGCCATTTGCCGTACCTTGGGGTAGTCCTTGAGGCTGTCGCTGTGGTGCATGGGTGAACATCCTGAATCATGTAt                                                    <  2:55967/148‑1 (MQ=255)
                                                                                                 cGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTAt                                                    <  3:80749/148‑1 (MQ=255)
                                                                                                    tGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGTGTGAACATCCTGAATCATGTATTGGc                                                <  3:138437/149‑1 (MQ=255)
                                                                                                      cGTGCCTGGCGGTCGACGATCTCCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGTGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGc                                                <  3:55165/147‑1 (MQ=255)
                                                                                                       gTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGcac                                              >  2:297554/1‑148 (MQ=255)
                                                                                                          ccTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAg                                                                                              <  5:87325/97‑1 (MQ=255)
                                                                                                          ccTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAg                                                                                              >  6:87325/1‑97 (MQ=255)
                                                                                                             ggCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCcg                                       >  3:326275/1‑149 (MQ=255)
                                                                                                                   cgacgaTCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTg                                                                                                             <  7:161111/73‑1 (MQ=255)
                                                                                                                   cgacgaTCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTg                                                                                                             >  8:161111/1‑73 (MQ=255)
                                                                                                                    gacgaTCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCa                                                                             <  1:199092/104‑1 (MQ=255)
                                                                                                                    gacgaTCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCa                                                                             >  2:199092/1‑104 (MQ=255)
                                                                                                                    gacgaTCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAag                                >  2:321815/1‑149 (MQ=255)
                                                                                                                           aCCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAaggccaggc                         <  2:242722/149‑1 (MQ=255)
                                                                                                                           aCCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAaggccagg                          <  2:119409/148‑1 (MQ=255)
                                                                                                                             cGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTTTTGGCACAAGCCCGCGAAAAGGCCAGGCCt                       >  3:332194/1‑149 (MQ=255)
                                                                                                                                  ccTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGaaa                   >  3:236506/1‑148 (MQ=255)
                                                                                                                                   cTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGAAAAc                 >  1:278369/1‑149 (MQ=255)
                                                                                                                                       cTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGAAAACTCAt             <  7:50781/149‑1 (MQ=255)
                                                                                                                                           gcTGTTCGA‑GATCATCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGaaa                                  <  4:30798/123‑1 (MQ=255)
                                                                                                                                           gcTGTTCGA‑GATCATCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGaaa                                  >  3:30798/2‑124 (MQ=255)
                                                                                                                                               ttCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGAAAACTCATCGTCgg       <  4:236506/147‑1 (MQ=255)
                                                                                                                                                  gatgatC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGAAAACTCATCGTCGGGGGTc  <  2:278369/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
ATCAGGCTGCCGGGGATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATC‑TCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGAAAACTCATCGTCGGGGGTC  >  NC_002947/3460078‑3460372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑