| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,009,718:1 | +A | 6.2% | intergenic (+78/‑94) | PP_4412 → / → PP_4413 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,009,718 | 1 | . | A | 6.2% | 252.7 / 9.7 | 64 | intergenic (+78/‑94) | PP_4412/PP_4413 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (31/29); new base A (2/2); total (33/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.45e-01 | |||||||||||
AAGTGTTTGGCTCTGGGCAGCAGCAGGATTCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCACTTCTTTGCCGCCTAGCCTTCTCTC > NC_002947/5009570‑5009866 | aaGTGTTTGGCTCTGGGCAGCAGCAGGATTCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATggcg > 6:197701/1‑149 (MQ=255) tgtTTGGCTCTGGGCAGCAGCAGGATTCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCCTATGgcg‑gcg > 8:123625/1‑149 (MQ=255) tGGGCAGCAGCAGGATTCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCt > 6:197139/1‑149 (MQ=255) gggCAGCAGCAGGATTCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCt > 7:164534/1‑148 (MQ=255) ggCAGCAGCAGGATTCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTa < 1:325844/149‑1 (MQ=255) ggCAGCAGCAGGATTCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGACGC‑C‑GCCATACGGCGAGCGGCTTggttca < 1:47744/147‑5 (MQ=38) cagcatgagGATTCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGGGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCCTGGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTAc < 1:92235/149‑1 (MQ=255) cagcagcagGATTCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACg < 2:109661/149‑1 (MQ=255) agGATTCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGAGTCCTGGGCGCGCCCTTCGTGCC‑GGCTGTCGTGAACCAAGCATCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCtac > 7:352752/1‑146 (MQ=255) ttCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATcc > 1:25576/1‑149 (MQ=255) tCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTCGGGCCTAAGGCG‑GCGTGATTGCCCTTACCGGCttgccta > 1:125600/1‑143 (MQ=255) gACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTcgc < 6:80935/149‑1 (MQ=255) cGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGt < 8:164534/149‑1 (MQ=255) gATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGGGGTCGTGAACCAAGCCCCAC‑GCCGTATGGCC‑GCGTCTTGGCCCTTACGGGCTTCCAACCTCGCGtc > 4:192151/1‑149 (MQ=255) cctcctCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTc > 7:223186/1‑149 (MQ=255) ctcctcCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCACGCGTCTCCGCCTTcc > 3:240639/1‑149 (MQ=255) tccAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGc > 4:298839/1‑149 (MQ=255) aaaCGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTgc < 4:240639/149‑1 (MQ=255) aaCGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGgcg‑gcg < 6:240246/99‑1 (MQ=255) aaCGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGgcg‑gcg > 5:240246/1‑99 (MQ=255) aCGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAACAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCGC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTgcgc < 5:197701/149‑1 (MQ=255) ggggAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTgcgcgc > 5:225086/1‑149 (MQ=255) ggggAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTAGGGCC‑GGCGGTCGTGAACCAATCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTAAGGGCTTGCATACTAGCCGCGCCGCCTTCCTGGCTtcgcgc > 3:214860/1‑149 (MQ=255) ctctTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCt > 5:353859/1‑149 (MQ=255) ttctAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGGCTCCGCCTTCCTGGCTGCGCGCTCCGCGTgg > 4:43005/1‑148 (MQ=255) gCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAAc > 6:380728/1‑149 (MQ=255) aGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGt > 2:122885/1‑148 (MQ=255) ctgcAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCaaa < 3:64587/148‑1 (MQ=255) ctgcAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCaaa < 3:192151/148‑1 (MQ=255) ctgcAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAAt > 7:13230/1‑149 (MQ=255) tgcAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGGTCTGCCCAACGTCAAAt > 1:349009/1‑148 (MQ=255) tgcAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAAt > 6:350412/1‑148 (MQ=255) cAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGTTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGa < 1:297911/148‑1 (MQ=255) cAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGa < 1:170567/148‑1 (MQ=255) cAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAg < 8:223186/149‑1 (MQ=255) aaaaGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGc > 6:169458/1‑149 (MQ=255) atgCGTCCTGGGCGGGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGTGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGt < 8:352752/147‑1 (MQ=255) aaGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCCTCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGa > 8:329286/1‑145 (MQ=255) aaGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGa < 7:329286/145‑1 (MQ=255) aaGCGTCCTGGGCGCGCCCATCGGGCC‑GGCTGTGGTGAAACAACCCGCAC‑GCCGTATTGGG‑GCGTCGTTGCCCGTTAGGGCTTGCCTACTAGCGGGTCCGCCGTGCTGGCATCGCGCGCCGCGTGCAAGGGCCCACGTCAAATGAGCgg > 4:370784/1‑148 (MQ=255) aGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGtc < 5:380728/149‑1 (MQ=255) gCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGGCTCCGCCTGCCTGGCTGCGCGCTCCGCTTGCTCTGCCCACCGTCAAATGCGCGtct > 6:192398/1‑149 (MQ=255) cTGGGCGCGCGCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTGTGCCCAACGTCAAATGAGCGtctttctt < 3:266226/149‑1 (MQ=255) cTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGtctttctt < 7:123625/149‑1 (MQ=255) ggCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTg < 4:139119/147‑1 (MQ=255) gcgcgcCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGc > 8:133350/1‑148 (MQ=255) gcgcgcCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCa > 8:153118/1‑149 (MQ=255) gcgcCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATc < 3:43005/149‑1 (MQ=255) cgcCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCt < 7:133350/149‑1 (MQ=255) gcCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTg > 4:195759/1‑149 (MQ=255) cTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCAt < 3:298839/149‑1 (MQ=255) cGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATg < 2:25576/147‑1 (MQ=255) cTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGtt < 4:27605/149‑1 (MQ=255) gTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTaa > 7:322814/1‑149 (MQ=255) gTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTaa > 7:330225/1‑149 (MQ=255) tCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAAc < 5:197139/149‑1 (MQ=255) tGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCa > 7:270477/1‑149 (MQ=255) ccAAGACGC‑C‑GCCATACGGCGAGCGGCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGTCCAACGTCAAATGAGCGTCTTTATTGGCATCTGCATGCCACCCTGTTAAATCActt > 2:336138/1‑148 (MQ=255) ccAAGACGC‑C‑GCCATACGGCGAGCGGCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCActtc > 4:266954/1‑149 (MQ=255) cAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCActtct < 8:330225/149‑1 (MQ=255) aaGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCActtctt > 2:58445/1‑149 (MQ=255) aaGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCActtctt > 7:172753/1‑149 (MQ=255) aGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCACTTCttt < 6:225086/149‑1 (MQ=255) gCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCACTTCTTTg < 1:58445/149‑1 (MQ=255) agacgcc‑GCCATACGGCGAGCGGCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCACTTCttt < 3:266954/143‑1 (MQ=255) gCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCACTTCTTTGCCGCCTa < 7:153118/149‑1 (MQ=255) gCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCACTTCTTTGCCGCCTa < 3:370784/149‑1 (MQ=255) gTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCACTTCTTTGCCGCCTAGcc > 2:69072/1‑149 (MQ=255) gcg‑tcgTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCACTTCTTTGCCGCCTAGCCTtct < 8:322814/148‑1 (MQ=255) gcg‑gcgTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCACTTCTTTGCCGCCTAGCCTtct < 1:69072/148‑1 (MQ=255) cg‑gcgTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCACTTCTTTGCCGCCTAGCCTtctc > 4:35082/1‑148 (MQ=255) g‑gcgTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCACTTCTTTGCCGCCTAGCCTtctctc < 6:353859/149‑1 (MQ=255) | AAGTGTTTGGCTCTGGGCAGCAGCAGGATTCAGACGATGAACCACCTCCTCCAAACGGGGAACTCTTCTAGGTAGGCCAGTGCTGCAAAAGCGTCCTGGGCGCGCCCTTCGGGCC‑GGCTGTCGTGAACCAAGCCGCTC‑GCCGTATGGCG‑GCGTCTTGGCCCTTACGGGCTTCCATCCTCGCGTCTCCGCCTTCCTGGCTGCGCGCTCCGCTTGCTCTGCCCAACGTCAAATGAGCGTCTTTCTTGGCATCTGCATGCCACCCTGTTAACTCACTTCTTTGCCGCCTAGCCTTCTCTC > NC_002947/5009570‑5009866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |