| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,420,602:1 | +T | 10.0% | intergenic (+85/+22) | ctpH → / ← PP_t62 | methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,420,602 | 1 | . | T | 10.0% | 291.2 / 26.2 | 80 | intergenic (+85/+22) | ctpH/PP_t62 | methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro |
| Reads supporting (aligned to +/- strand): ref base . (39/33); new base T (2/6); total (41/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCAGCGCCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAGCCCTTGTTGT > NC_002947/2420457‑2420749 | gCAGCGCCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCg > 4:276317/1‑149 (MQ=255) cAGCGCCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCgg < 6:46149/149‑1 (MQ=255) cgcCTGCATGGTTTGTCATGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGTCTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCt < 7:314009/149‑1 (MQ=255) ccTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCACCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGC‑CATGTGCGGGCttt < 7:160552/149‑1 (MQ=255) cTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCTCCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTtg < 6:270514/149‑1 (MQ=255) cTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGC‑CATGTGCGGGCTTtg < 7:130476/149‑1 (MQ=255) cATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGC‑CATGTGCGGGCTTtgt < 2:64228/147‑1 (MQ=255) gTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACaa < 5:371155/148‑1 (MQ=255) gTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAg > 1:7876/1‑149 (MQ=255) tGTCAGGGCAGTTGGGGGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTATGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGa < 7:211831/148‑1 (MQ=255) cgggCACTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTg < 3:275953/147‑1 (MQ=255) cAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCg > 7:108050/1‑148 (MQ=255) aggtGGGCGAAGGCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGga < 2:348494/146‑1 (MQ=255) aGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCg > 1:175864/1‑147 (MQ=255) ttGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGgaga < 3:276317/149‑1 (MQ=255) ttGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGga > 2:169976/1‑147 (MQ=255) cGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAg > 4:293764/1‑149 (MQ=255) aaGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGa < 5:237717/149‑1 (MQ=255) gTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGAtt < 8:108050/149‑1 (MQ=255) tCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTc > 5:207666/1‑149 (MQ=255) cACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTc > 8:136411/1‑148 (MQ=255) cTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAAc > 2:9791/1‑149 (MQ=255) cTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAAc > 3:292353/1‑149 (MQ=255) ccGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCt < 7:136411/148‑1 (MQ=255) gCCTGAGTGCCTGACTCGGTCGGCAGGAGTTGCAGGTGCCATAGAGGCTGACGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCGTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCg > 8:243123/1‑149 (MQ=255) tGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCAGATGACTTATTTTTCGCACAAAAAAAAAACCCCGCACATG‑GCGGGCTTTGTGAAAAGTATTTGTTCGGAGAGACAGGATTCGAACATGCgcc > 1:103195/1‑147 (MQ=255) tGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACACCACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTtc < 4:150999/148‑1 (MQ=255) gCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTtctc > 2:12543/1‑149 (MQ=255) ccTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCt < 5:131515/97‑1 (MQ=255) ccTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCt > 6:131515/1‑97 (MQ=255) tGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGCCGTATTTTTCGCGCACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTGTGTCGGAGCGACAGGATTCGAACCTGCGGCCTTCTCGTc > 6:196445/1‑149 (MQ=255) tGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTc > 7:240817/1‑149 (MQ=255) gACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTcc > 4:110975/1‑149 (MQ=255) aCTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTccc < 4:292353/149‑1 (MQ=255) aCTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTcc < 6:207666/148‑1 (MQ=255) tCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCg > 6:1742/1‑148 (MQ=255) tCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTtgtg < 1:167858/92‑1 (MQ=255) tCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTtgtg > 2:167858/1‑92 (MQ=255) aGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGAcgc > 1:273456/1‑149 (MQ=255) aGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTgg < 8:240817/149‑1 (MQ=255) gTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCt > 6:328059/1‑149 (MQ=255) aTAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTtctc > 5:53076/1‑117 (MQ=255) aTAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTtctc < 6:53076/117‑1 (MQ=255) agGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTacac > 4:322958/1‑149 (MQ=255) gCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTc < 5:1742/149‑1 (MQ=255) gCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTc < 1:9791/149‑1 (MQ=255) gCTGAAGCCGAGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTc > 8:200048/1‑149 (MQ=255) ttaaGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTcc > 7:78289/3‑148 (MQ=255) tGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTcc > 5:59699/1‑148 (MQ=255) tGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTcc > 8:123993/1‑148 (MQ=255) gAAGCCTCGCA‑ATGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGa > 6:157630/1‑149 (MQ=255) aaGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGAt > 6:118781/1‑149 (MQ=255) aaGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGAt < 2:7876/149‑1 (MQ=255) aGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATg < 1:72760/149‑1 (MQ=255) ccGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGaa < 2:103195/149‑1 (MQ=255) ccGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGa > 7:29519/1‑148 (MQ=255) cagcgcA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGAACATG‑GCGGGCTTTGTGACAAGGATTAGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGaa > 3:253880/3‑149 (MQ=255) gcgcA‑CTGACGTATTTTTCGCACACAACACTAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAAc > 1:33207/1‑148 (MQ=255) aCGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTa > 5:41702/1‑149 (MQ=255) aCGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTa < 7:200048/149‑1 (MQ=255) cGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTa < 3:110975/148‑1 (MQ=255) cGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTAc < 1:169976/149‑1 (MQ=255) aTTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATc > 4:314604/1‑142 (MQ=255) aTTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATc < 3:314604/142‑1 (MQ=255) tCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATcc < 2:273456/148‑1 (MQ=255) cacacaACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGtt < 8:78289/149‑1 (MQ=255) acacaacacaAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGttt < 3:322958/149‑1 (MQ=255) ttttcacacaGCCCGC‑CATGTGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGa < 8:329773/116‑1 (MQ=255) acaacacaaAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGttttt > 7:106625/1‑149 (MQ=255) acaacacaaAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGACACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGCTGAACAAAATCCTACTGCATCCCGttatt > 7:315098/1‑149 (MQ=255) cacaaAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTc < 3:293764/149‑1 (MQ=255) acaaAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCg > 1:57120/1‑149 (MQ=255) caaAGCCCGC‑CATGTGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCg > 3:258286/1‑148 (MQ=255) caaAGCCCGC‑CATGTGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGc < 7:117965/149‑1 (MQ=255) aaaGCCCGC‑CATGTGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACt > 7:302879/1‑129 (MQ=255) aaaGCCCGC‑CATGTGCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACt < 8:302879/129‑1 (MQ=255) aaGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCaa < 5:328059/149‑1 (MQ=255) gCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAGc > 5:29881/1‑149 (MQ=255) gCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAGCCCtt > 4:366631/1‑149 (MQ=255) tG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACATGATTCGAACCTGCGGCCTTCTCTTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAGCCCTtgttgt < 1:12543/149‑1 (MQ=255) | GCAGCGCCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCTCCCGCCTGAGTGCCTGACTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCA‑CTGACGTATTTTTCGCACACAACACAAAGCCCGCACATG‑GCGGGCTTTGTGACAAGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACTGCATCCCGTTTTTGCTCGCAAGCCCTTGTTGT > NC_002947/2420457‑2420749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |