Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,460,230:1 +A 8.6% coding (132/1446 nt) PP_3075 ← transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,460,2301.A 8.6% 216.4 / 16.0 58coding (132/1446 nt)PP_3075transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base . (26/27);  new base A (2/3);  total (28/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

CTGCCGGGGATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGAAAACTCATCGTCGGGGGTC  >  NC_002947/3460084‑3460372
                                                                                                                                                   |                                                                                                                                              
cTGCCGGGGATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGAtctc                                                                                                                                              <  7:337814/149‑1 (MQ=255)
   ccGGGGATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTCCGATGATCTCGaa                                                                                                                                           <  2:88288/149‑1 (MQ=255)
     ggggATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGaa                                                                                                                                           >  2:123003/1‑147 (MQ=255)
       ggATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACagc                                                                                                                                       <  5:293293/149‑1 (MQ=255)
       ggATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGAGATCATCGAACagt                                                                                                                                       <  6:254480/149‑2 (MQ=255)
        gATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACagc                                                                                                                                       >  1:242722/1‑148 (MQ=255)
              tGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGCACAGCGAGCGGa                                                                                                                                >  8:152810/1‑149 (MQ=255)
               gTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGAGATCATCGAACagtcca                                                                                                                                    <  5:290755/144‑5 (MQ=255)
               gTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGAGATCATCGAACagtcca                                                                                                                                    >  6:290755/1‑140 (MQ=255)
                tttCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATc                                                                                                                              <  2:100450/149‑1 (MQ=255)
                  tCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCg                                                                                                                             <  2:145037/148‑1 (MQ=255)
                    gCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCa                                                                                                                          <  1:89184/149‑1 (MQ=255)
                                gATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTAATCCAGACGATGCGTGCCTGGCGGTCGACGTTCACCGTGCCCTCGATGGACTGTTCGATGATCTCGAACATCGAGCGGATCGCCAGTTGCCGTAcat                                                                                                              >  6:307526/1‑147 (MQ=255)
                                  tGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTgg                                                                                                            <  6:321674/149‑1 (MQ=255)
                                    gCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTgggg                                                                                                          <  1:123003/149‑1 (MQ=255)
                                     cACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTggggg                                                                                                         <  2:30148/149‑1 (MQ=255)
                                      aCTGGCAGCGTCGGCCAGGCCAAAGCGTCGGTCGTAGCGTTCGTTCATCCAGAAGATGCGTGCCTGGCGGTCGCAGATCACCGTGCCCTCGCTGGACTGTTCGATGATATCCACCAGCGAGCGGATAGCCAGTTGc                                                                                                                     >  4:132716/1‑136 (MQ=255)
                                      aCTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCGGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGc                                                                                                                     <  3:132716/136‑1 (MQ=255)
                                       cTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTa                                                                                                       <  4:70528/149‑1 (MQ=255)
                                           cAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTTCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTcc                                                                                                   >  4:80749/1‑149 (MQ=255)
                                                          caAAGCGTCGGGCGTAGCGTTCGTTCATCCAGAAGATGCGTGCCTGGCGGTAGACGATCACCGTGCACTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGgctgtcgctg                                                                                    >  1:55967/1‑149 (MQ=255)
                                                                gTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTg                                                                               >  2:329348/1‑148 (MQ=255)
                                                                    ggCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATgg                                                                          <  1:45761/149‑1 (MQ=255)
                                                                    ggCGTAGCGTTCGGTCATCCAGACGATGCGTGCCTGGCGGTCGACGAGCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATgg                                                                          <  4:304340/149‑1 (MQ=255)
                                                                    ggCGTAGCGATCGTTAATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTAGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGATGCCGAACCTCGGGGTAGTCCATGAGCATGTCGCTGACGTGCATgg                                                                          >  4:138437/1‑149 (MQ=255)
                                                                       gTAGCGTTCGTTCTTCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGt                                                                        >  8:50781/1‑148 (MQ=255)
                                                                        tAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTg                                                                       >  1:373971/1‑148 (MQ=255)
                                                                          gCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAAc                                                                    <  2:198108/149‑1 (MQ=255)
                                                                                gttcATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAAc                                                                    <  1:192781/143‑1 (MQ=255)
                                                                                gttcATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAAc                                                                    >  2:192781/1‑143 (MQ=255)
                                                                                gttcATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCt                                                               >  2:38003/1‑148 (MQ=255)
                                                                                gttcATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCt                                                               <  1:329348/148‑1 (MQ=255)
                                                                                     tCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGTTCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCa                                                         >  1:119409/1‑149 (MQ=255)
                                                                                     tCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCa                                                         >  3:42066/1‑149 (MQ=255)
                                                                                     tCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCa                                                         >  2:14772/1‑149 (MQ=255)
                                                                                         gACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTa                                                     >  4:55165/1‑149 (MQ=255)
                                                                                           cGATGCGTGCGTTGCTGTCGACGATGACCGTGCGCTCTCTGGACTGTTGGATGATCTATAACAGCGAGCTTATCGCCATTTGCCGTACCTTGGGGTAGTCCTTGAGGCTGTCGCTGTGGTGCATGGGTGAACATCCTGAATCATGTAt                                                    <  2:55967/148‑1 (MQ=255)
                                                                                           cGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTAt                                                    <  3:80749/148‑1 (MQ=255)
                                                                                              tGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGTGTGAACATCCTGAATCATGTATTGGc                                                <  3:138437/149‑1 (MQ=255)
                                                                                                cGTGCCTGGCGGTCGACGATCTCCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGTGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGc                                                <  3:55165/147‑1 (MQ=255)
                                                                                                 gTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGcac                                              >  2:297554/1‑148 (MQ=255)
                                                                                                    ccTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAg                                                                                              <  5:87325/97‑1 (MQ=255)
                                                                                                    ccTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAg                                                                                              >  6:87325/1‑97 (MQ=255)
                                                                                                       ggCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCcg                                       >  3:326275/1‑149 (MQ=255)
                                                                                                             cgacgaTCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTg                                                                                                             >  8:161111/1‑73 (MQ=255)
                                                                                                             cgacgaTCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTg                                                                                                             <  7:161111/73‑1 (MQ=255)
                                                                                                              gacgaTCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCa                                                                             >  2:199092/1‑104 (MQ=255)
                                                                                                              gacgaTCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCa                                                                             <  1:199092/104‑1 (MQ=255)
                                                                                                              gacgaTCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAag                                >  2:321815/1‑149 (MQ=255)
                                                                                                                     aCCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAaggccaggc                         <  2:242722/149‑1 (MQ=255)
                                                                                                                     aCCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAaggccagg                          <  2:119409/148‑1 (MQ=255)
                                                                                                                       cGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTTTTGGCACAAGCCCGCGAAAAGGCCAGGCCt                       >  3:332194/1‑149 (MQ=255)
                                                                                                                            ccTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGaaa                   >  3:236506/1‑148 (MQ=255)
                                                                                                                             cTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGAAAAc                 >  1:278369/1‑149 (MQ=255)
                                                                                                                                 cTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGAAAACTCAt             <  7:50781/149‑1 (MQ=255)
                                                                                                                                     gcTGTTCGAGATCATCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGaaa                                  >  3:30798/2‑124 (MQ=255)
                                                                                                                                     gcTGTTCGAGATCATCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGaaa                                  <  4:30798/123‑1 (MQ=255)
                                                                                                                                         ttCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGAAAACTCATCGTCgg       <  4:236506/147‑1 (MQ=255)
                                                                                                                                            gatgatCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGAAAACTCATCGTCGGGGGTc  <  2:278369/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                              
CTGCCGGGGATCACTGTTTCGCACGGCTGGCCGATGGCACTGGCAGCGTCGGCCAGGCCAAAGCGTCGGGCGTAGCGTTCGTTCATCCAGACGATGCGTGCCTGGCGGTCGACGATCACCGTGCCCTCGCTGGACTGTTCGATGATCTCGAACAGCGAGCGGATCGCCAGTTGCCGTACCTGGGGGTAGTCCTTGAGGCTGTCGCTGTCGTGCATGGGTGAACATCCTGAATCATGTATTGGCACAAGCCCGCGAAAAGGCCAGGCCTGAAAACTCATCGTCGGGGGTC  >  NC_002947/3460084‑3460372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: