New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 7023462 (1.030)4 (0.070) 4/250 NT 6.2% coding (1671/2055 nt) glyS glycine‑tRNA ligase subunit beta
?NC_002947 = 70267 63 (1.110)coding (1638/2055 nt) glyS glycine‑tRNA ligase subunit beta

AGGGAGAACTCGTTGGCATTGTCGAAGTACTTCGGCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTACGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/70079‑70234
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtacgcgcACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGCCGAG  <  NC_002947/70267‑70123
                                                                                                                                                                                                                                                                                                             
AGGGAGAACTCGTTGGCATTGTCGAAGTACTTCGGCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTG                                                                                                                                                          >  6:166350/1‑149
  GGAGAACTCGTTGGCATTGTCGAAGTACTTCGGCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTA                                                                                                                                                        <  5:166350/149‑1
  GGAGAACTCGTTGGCATTGTCGAAGTACTTCGGCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTA                                                                                                                                                        >  2:224409/1‑149
   GAGAACTCGTTGGCATTGTCGAAGTACTTCGGCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTAC                                                                                                                                                       <  3:224545/149‑1
                                  GCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCGCCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGT                                                                                                                                                         >  6:269077/1‑116
                                  GCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCGCCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGT                                                                                                                                                         <  5:269077/116‑1
                                         CTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAG                                                                                                                 >  2:191740/1‑149
                                                  GATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAA                                                                                                        <  1:191740/149‑1
                                                                CCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGC                                                                                                      <  2:327957/137‑1
                                                                CCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGC                                                                                                      >  1:327957/1‑137
                                                                                                                                                    GTACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGa      >  1:224409/1‑148
                                                                                                                                                    GTACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGC      <  8:333467/149‑1
                                                                                                                                                     TACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGCC     <  3:330178/149‑1
                                                                                                                                                       CGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGCCGA   <  2:228466/149‑1
                                                                                                                                                       CGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGCCGA   <  2:202740/149‑1
                                                                                                                                                        GCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGCCGAG  <  1:139573/149‑1
                                                                                                                                                        GCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGCCGAG  >  8:258677/1‑149
                                                                                                                                                         CGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGA                                                                           <  7:326560/75‑1
                                                                                                                                                         CGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGA                                                                           >  8:326560/1‑75
                                                                                                                                                                                                                                                                                                             
AGGGAGAACTCGTTGGCATTGTCGAAGTACTTCGGCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTACGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/70079‑70234
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtacgcgcACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGCCGAG  <  NC_002947/70267‑70123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.