| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 195962 | 120 (1.990) | 9 (0.150) | 4/264 | NT | 6.7% | coding (1468/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | = 196243 | 131 (2.190) | coding (1749/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
CTACAACAACGGCTCGACCGTCAGCGTCACCATCGAGAGCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/195814‑195962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGTCGCGGTAGTGGTGTCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGTTGCTCGAAATTACCGCCCGTGGCGTTCTCGATGGTGACGCTGACCGTCGAACCGTTGTTGTAGACGTCATTGGCCGGG < NC_002947/196243‑196099 CTACAACAACGGCTCGACCGTCAGCGTCACCATCGAGAGCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG > 6:215502/1‑149CTACAACAACGGCTCGACCGTCAGCGTCACCATCGAGAGCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG > 8:3978/1‑149 CAACAACGGCTCGACCGTCAGCGTCACCATCGAGAGCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG < 1:341284/146‑1 CACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGGGAGGGGCGCGGTGGTGGTGTGGACCGAGTCGTTGATCGGGGTCTGAGCCGGGGGCGGATTCGGGGTGAGGTGCTCGAAATTTCCGCCGGTGGCGgt > 2:266863/1‑147 GATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGGGTCGCGGTAGTGGTGTCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGGCAGTTGCTCGAAATTACCGCCCGTGGCGTTCTC > 2:286359/1‑149 CACCGCGACCCTGACGGCGAGCCCGTCGGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCG > 5:303367/1‑88 CACCGCGACCCTGACGGCGAGCCCGTCGGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCG < 6:303367/88‑1 CCTGACGGCGAGCCCGTCGGGGTCGCGGTAGTGGTGTCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGTTGCTCGAAATTACCGCCCGTG > 3:370583/1‑108 CCTGACGGCGAGCCCGTCGGGGTCGCGGTAGTGGTGTCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGTTGCTCGAAATTACCGCCCGTG < 4:370583/108‑1 CCTGACGGCGAGCCCGTCAGGGTCGCGGTTGTGGTTGCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGG < 5:304042/74‑1 CCTGACGGCGAGCCCGTCAGGGTCGCGGTAGTGGTGTCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGG > 6:304042/1‑74 CTGACGGCGAGCCCGTCAGGGTCGCGGTAGTGGTGTCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGTTGCTCGAAATTACCGCCCGTGGCGTTCTCGATGGTGACGCTGACCGTCGAACCGTTGTTG > 6:80698/1‑146 TCGGGGGCGCGGTAGTGGTGTCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGTTGCTCGAAATTACCGCCCGTGGCGTTCTCGATGGTGACGCTGACCGTCGAACCGTTGTTGTAGACGTCATTGGCCGGG < 1:286359/149‑1 CTACAACAACGGCTCGACCGTCAGCGTCACCATCGAGAGCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/195814‑195962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGTCGCGGTAGTGGTGTCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGTTGCTCGAAATTACCGCCCGTGGCGTTCTCGATGGTGACGCTGACCGTCGAACCGTTGTTGTAGACGTCATTGGCCGGG < NC_002947/196243‑196099 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |