New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	283801 =	68 (1.130)	5 (0.090)	5/248	NT	7.6%	coding (1252/2004 nt)	betT‑II	choline/carnitine/betaine transporter
	?	NC_002947	283891 =	59 (1.050)					coding (1342/2004 nt)	betT‑II	choline/carnitine/betaine transporter

AACAGCGCACTGGTGATCAGTGCAGTCATCGCCCCCCAAAAGATACGCAGCCAGTTCGGCCCATCTTCATCAGCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/283955‑283801 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgatgaaGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCATCGATTCGCTGAAGTCGGCAGTGGTGCTGACGTCGCTGCCGTTCTCGCTCATTCTGCTGTGCAT  >  NC_002947/283891‑284033                                                                                                                                                                                                                                                                                                            AACAGCGCACTGGTGATCAGTGCAGTCATCGCCCCCCAAAAGATACGCAGCCAGTTCGGCCCATCTTCATCAGCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCT                                                                                                                                                       >  8:344086/1‑149  ACAGCGCACTGGTGATCAGTGCAGTCATCGCCCCCCAAAAGATACGCAGCCAGTTCGGCCCATCTTCATCAGCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGAGACGAAGAACCCGAAGat                                                                                                                                                       >  2:207382/1‑146   CAGCGCACTGGTGATCAGTGCAGTCATCGCCCCCCAAAAGATACGCAGCCAGTTCGGCCCATCTTCATCAGCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGA                                                                                                                                                     <  5:223047/149‑1    actGCACTGATCACCAGTGCAGTCATCGCCCCCCAAAAGATACGCAGCCAGTTCGGCCCATCTTCATCAGCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGAT                                                                                                                                                    >  3:347188/4‑149    AGCGCACTGGTGATCAGTGCAGTCATCGCCCCCCAAAAGATACGCAGCCAGTTCGGCCCATCTTCATCATCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGAT                                                                                                                                                    <  8:273276/149‑1    AGCGCACTGGTGATCAGTGCAGTCATCGCCCCCCAAAAGATACGCAGCCAGTTCGGCCCATCTTCATCAGCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGAT                                                                                                                                                    <  1:203449/149‑1     GCGCACTGGTGATCAGTGCAGTCATCGCCCCCCAAAAGATACGCAGCCAGTTCGGCCCATCTTCATCAGCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGAT                                                                                                                                                    >  2:165182/1‑148                                                            CCCATCTTCATCAGCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCAC                                                                                            >  2:364198/1‑149                                                                             CACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGAC‑‑‑‑‑‑‑‑‑‑‑‑GCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCATC                                                                >  1:98384/1‑148                                                                                   CCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGAC‑‑‑‑‑‑‑‑‑‑‑‑GCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCATCGATTCGC                                                         <  2:98384/149‑1                                                                                                      CAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCATCGATTCGCTGAAGTC                                                  <  2:303156/149‑1                                                                                                                 TGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCATCGATTCGCTGAAGTCGGCAGTGGTGC                                       <  1:364198/149‑1                                                                                                                                                    CTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCATCGATTCGCTGAAGTCGGCAGTGGTGCTGACGTCGCTGCCGTTCTCGCTCATTCTGCTGTGC    <  5:310296/149‑1                                                                                                                                                       ATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATTACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCATCGATTCGCTGAAGTCGGCAGTGGTGCTGACGTCGCTGCCGTTCTCGCTCATTCTGCTGTGCAT  >  6:169088/1‑148                                                                                                                                                                                                                                                                                                            AACAGCGCACTGGTGATCAGTGCAGTCATCGCCCCCCAAAAGATACGCAGCCAGTTCGGCCCATCTTCATCAGCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/283955‑283801 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgatgaaGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCATCGATTCGCTGAAGTCGGCAGTGGTGCTGACGTCGCTGCCGTTCTCGCTCATTCTGCTGTGCAT  >  NC_002947/283891‑284033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.