New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 314874 | 53 (0.880) | 4 (0.070) | 3/252 | NT | 6.1% | coding (270/567 nt) | nudE | ADP compounds hydrolase NudE |
? | NC_002947 | = 314916 | 74 (1.300) | coding (312/567 nt) | nudE | ADP compounds hydrolase NudE |
TGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/314723‑314874 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgTGCGCCAAAACCGGCTTCTTCCTTGAGCTCCCGGTCGGCTGCCGCCAGCACGTCTTCGCCCGGCTCGATCAGGCCCTTGGGCAACGACAGCTCGTATTCATCGGTGCCACCGCAGTATTCCTCCACCAGCACGGCGTGCTCG < NC_002947/314916‑314775 TGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTG > 5:78426/1‑149 GGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATACCGAGCAAGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATGGAGCCGGGCGAAGACGAGCTGG > 1:87863/1‑149 GGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGC < 8:317797/149‑1 GGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGCG > 7:148920/1‑145 GGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGCG < 8:148920/145‑1 GATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGC < 5:359609/104‑1 GATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGC > 6:359609/1‑104 AGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGCGTGCGCCAAAACCGGCTTCTTCCTTGAGCTCCCGGTCGGCTGCCGCCAGCAC < 2:264178/149‑1 AGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGCGTGCGCCAAAACCGGCTTCTTCCTTGAGCTCCCGGTCGGCTGCCGCCAGCAC < 4:280312/149‑1 ACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGCGTGCGCCAAAACCGGCTTCTTCCTTGAGCTCCCGGTCGGCTGCC < 7:302850/106‑1 ACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGCGTGCGCCAAAACCGGCTTCTTCCTTGAGCTCCCGGTCGGCTGCC > 8:302850/1‑106 GCTGGCGTGCGCCAAAACCGGCTTCTTCCTTGAGCTCCCGGTCGGCTGCCGCCAGCACGTCTTCGCCCGGCTCGATCAGGCCCTTGGGCAACGACAGCTCGTATTCATCGGTGCCACCGCAGTATTCCTCCACCAGCACGGCGTGCTCG < 2:51333/149‑1 GTGCGCCAAAACCGGCTTCTTCCTTGAGCTCCCGGTCGGCTGCCGCCAGCACGTCTTCGCCCGGCTCGATCAGGCCCTTGGGCAACGACAGCTCGTATTCATCGGTGCCACCG > 5:290217/1‑113 GTGCGCCAAAACCGGCTTCTTCCTTGAGCTCCCGGTCGGCTGCCGCCAGCACGTCTTCGCCCGGCTCGATCAGGCCCTTGGGCAACGACAGCTCGTATTCATCGGTGCCACCG < 6:290217/113‑1 TGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/314723‑314874 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgTGCGCCAAAACCGGCTTCTTCCTTGAGCTCCCGGTCGGCTGCCGCCAGCACGTCTTCGCCCGGCTCGATCAGGCCCTTGGGCAACGACAGCTCGTATTCATCGGTGCCACCGCAGTATTCCTCCACCAGCACGGCGTGCTCG < NC_002947/314916‑314775 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |