| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 385871 = | 72 (1.200) | 4 (0.070) | 3/252 | NT | 5.6% | coding (665/1041 nt) | ltaE | low specificity l‑threonine aldolase |
| ? | NC_002947 | 385908 = | 67 (1.180) | coding (628/1041 nt) | ltaE | low specificity l‑threonine aldolase | |||||
GCACATGGACGGCGCACGCTTTACCAATGCCTGTGCGTTCCTGGGCTGCAGCCCGGCCGAACTGACCTGGAAGGCCGGTGTGGATGTGCTGTGCTTTGGCGGCACCAAGAACGGCATGGCGGTGGGCGAAGCGATTCTGTTCTTCAACCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/386023‑385871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccaTGCCGTT‑CTTGGTGCCGCCAAAGCACAGCACATCCACACCGGCCTTCCAGGTCAGTTCGGCCGGGCTGCAGCCCAGGAACGCACAGGCATTGGTAAAGCGTGCGCCGTCCATGTGCAGGTTCAGGCCCAGCTCCTTGCAGGTGGCGCT > NC_002947/385908‑386055 GCACATGGACGGCGCACGCTTTACCAATGCCTGTGCGTTCCTGGGCTGCAGCCCGGCCGAACTGACCTGGAAGGCCGGTGTGGATGTGCTGTGCTTTGGCGGCACCAAGAACGGCATGGCGGTGGGCGAAGCGATTCTGTTCTTCAACC > 7:31458/1‑149 ATGGACGGCGCACGCTTTACCAATGCCTGTGCGTTCCTGGGCTGCAGCCCGGCCGAACTGACCTGGAAGGCCGGTGTGGATGTGCTGTGCTTTGGCGGCACCAAGAACGGCATGGCGGTGGGCGAAGCGATTCTGTTCTTCAACCGC > 7:168090/1‑147 GCATGGCGGTGGGCGAAGCGATTCTGTTCTTCAACCGCCATGCCGTTGCTTGGTGCCGCCAAAGCACAGCACATCCACACCGGCCTTCCAGGTCAGTTCGGCCGGGCTGCAGCCCAGGAACGCACAGGCATTGGTAAAGCGTGCGCCGT > 1:270137/1‑149 GCATGGCGGTGGGCGAAGCGATTCTGTTCTTCAACCGCCATGCCGTT‑CTTGGTGCCGCCAAAGCACAGCACATCCACACCGGCCTTCCAGGTCAGTTCGGCCGGGCTGCAGCCCAGGAACGCACAGGCATTGGTAAAGCGTGCGCCGTC > 3:16171/1‑149 CATGGCGGTGGGCGAAGCGATTCTGTTCTTCAACCGCCATGCCGTT‑CTTGGTGCCGCCAAAGCACAGCACATCCACACCGGCCTTCCAGGTCAGTTCGGCCGGGCTGCAGCCCAGGAACGCACAGGCATTGGTAAAGCGT > 1:203991/1‑140 CATGGCGGTGGGCGAAGCGATTCTGTTCTTCAACCGCCATGCCGTT‑CTTGGTGCCGCCAAAGCACAGCACATCCACACCGGCCTTCCAGGTCAGTTCGGCCGGGCTGCAGCCCAGGAACGCACAGGCATTGGTAAAGCGT < 2:203991/140‑1 CGCCATGCCGTT‑CTTGGTGCCGCCAAAGCACAGCACATCCACACCGGCCTTCCAGGTCAGTTCGGCCGGGCTGCAGCCCAGGAACGCACAGGCATTGGTAAAGCGTGCGCCGTCCATGTGCAG < 6:66857/123‑1 CGCCATGCCGTT‑CTTGGTGCCGCCAAAGCACAGCACATCCACACCGGCCTTCCAGGACAGTTCGGCCGGGCTGAAGCCCAGGAACGCACAGGCATTGGAAAACCTTGCGCCGTCCATGTGCAGGATCAGGACCAGCTCCATGCAGGTGt > 8:264376/1‑148 GCCATGCCGTT‑CTTGGTGCCGCCAAAGCACAGCACATCCACACCGGCCTTCCAGGTCAGTTCGGCCGGGCTGCAGCCCAGGAACACACAGGCATTGGTAAAGCGTGCGCCGTCCATGTGCAGGTTCAGGCCCAGCTCCTTGCAGGTGGC > 2:72636/1‑149 ATGCCGTT‑CTTGGTGCCGCCAAAGCACAGCACATCCACACCGGCCTTCCAGGTCAGTTCGGCCGGGCTGCAGCCCAGGAACGCACAGGCATTGGTAAAGCGTGCGCCGTCCATGTGCAGGTTCAGGCCCAGCTCCTTGCAGGTGGCGCT > 8:31118/1‑149 GCACATGGACGGCGCACGCTTTACCAATGCCTGTGCGTTCCTGGGCTGCAGCCCGGCCGAACTGACCTGGAAGGCCGGTGTGGATGTGCTGTGCTTTGGCGGCACCAAGAACGGCATGGCGGTGGGCGAAGCGATTCTGTTCTTCAACCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/386023‑385871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccaTGCCGTT‑CTTGGTGCCGCCAAAGCACAGCACATCCACACCGGCCTTCCAGGTCAGTTCGGCCGGGCTGCAGCCCAGGAACGCACAGGCATTGGTAAAGCGTGCGCCGTCCATGTGCAGGTTCAGGCCCAGCTCCTTGCAGGTGGCGCT > NC_002947/385908‑386055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |