| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 436471 = | 77 (1.280) | 4 (0.070) | 4/254 | NT | 5.4% | coding (817/888 nt) | PP_0358 | membrane protein |
| ? | NC_002947 | 436522 = | 67 (1.170) | coding (766/888 nt) | PP_0358 | membrane protein | |||||
TGACGCTGGTGCCGCTGGTATGCTTCAACGCCGCCGCACGGCACCTGCCGTACACCACGCTGGGCTTCCTGCAGTACCTGGCGCCGACCTTGGTGCTGTTGCAGGCCGTAGTGCTGTTCGACGAGCATTTGTCGTCGAGCACCCTGGCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/436623‑436471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctGCAACAGCACCAAGGTCGGCGCCAGGTACTGCAGGAAGCCCAGCGTGGTGTACGGCAGGTGCCGTGCGGCGGCGTTGAAGCATACCAGCGGCACCAGCGTCACCGGCCCGGCCGCCATCAGCCACAGCGCCTCGCTGCTGGTA > NC_002947/436522‑436664 TGACGCTGGTGCCGCTGGTATGCTTCAACGCCGCCGCACGGCACCTGCCGTACACCACGCTGGGCTTCCTGCAGTACCTGGCGCCGACCTTGGTGCTGTTGCAGGCCGTAGTGCTGTTCGACGAGCATTTGTCGTCGAGCACCCTGGCG < 1:181492/149‑1 CAGGCCGTAGTGCTGTTCGACGAGCATTTGTCGTCGAGCACCCTGGCGGCCTGCAACAGCACCAAGGTCGGCGCCAGGTACTGCAGGAAGC < 3:315654/91‑1 CAGGCCGTAGTGCTGTTCGACGAGCATTTGTCGTCGAGCACCCTGGCGGCCTGCAACAGCACCAAGGTCGGCGCCAGGTACTGCAGGAAGC > 4:315654/1‑91 AGGCCGTAGTGCTGTTCGACGAGCATTTGTCGTCGAGCACCCTGGCGGCCTGCAACAGCACCAAGGTCGGCGCCAGGTACTGCAGGAAGCCCAGCGTGGTGTACGGCAGGTGCCGTGCGGCGGCGTTGAAGCAT > 1:287120/1‑134 AGGCCGTAGTGCTGTTCGACGAGCATTTGTCGTCGAGCACCCTGGCGGCCTGCAACAGCACCAAGGTCGGCGCCAGGTACTGCAGGAAGCCCAGCGTGGTGTACGGCAGGTGCCGTGCGGCGGCGTTGAAGCAT < 2:287120/134‑1 GCCTGCAACAGCACCAAGGTCGGCGCCAGGTACTGCAGGAAGCCCAGCGTGGTGTACGGCAGGTGCCGTGCGGCGGCGTTGAAGCATACCAGCGGCACCAGCGTCACCGGCCCGGCCGCCATCAGCCACAGCGCCTCGCTGCTGGTA > 5:323941/1‑147 TGACGCTGGTGCCGCTGGTATGCTTCAACGCCGCCGCACGGCACCTGCCGTACACCACGCTGGGCTTCCTGCAGTACCTGGCGCCGACCTTGGTGCTGTTGCAGGCCGTAGTGCTGTTCGACGAGCATTTGTCGTCGAGCACCCTGGCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/436623‑436471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctGCAACAGCACCAAGGTCGGCGCCAGGTACTGCAGGAAGCCCAGCGTGGTGTACGGCAGGTGCCGTGCGGCGGCGTTGAAGCATACCAGCGGCACCAGCGTCACCGGCCCGGCCGCCATCAGCCACAGCGCCTCGCTGCTGGTA > NC_002947/436522‑436664 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |