New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 60032773 (1.210)6 (0.100) 6/256 NT 7.6% coding (154/480 nt) nrdR DNA‑binding transcriptional repressor NrdR
?NC_002947 = 600361 75 (1.300)coding (188/480 nt) nrdR DNA‑binding transcriptional repressor NrdR

TTGCCTGCCACCATGCACTGTCCCTTTTGCGGTGCCAACGACACCAAGGTCATCGACTCTCGCCTCGTCGCCGAGGGCGAGCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/600177‑600327
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggCGCGTGCCGTCCTGCTTGATCAGCCGGGGCAGCACCAGCTCGGCGGTTTCGAAGGTGGTGAAGCGCTCGCCGCAGGCCACGCATTCACGGCGGCGGCGCACCTGCTCGCCCTCGGCGACGAGGCGAGAGTCGATGACCTTGGTGTCGT  <  NC_002947/600361‑600214
                                                                                                                                                                                                                                                                                                           
TTGCCTGCCACCATGCACTGTCCCTTTTGCGGTGCCAACGACACCAAGGTCATCGACTCTCGCCTCGTCGCCGAGGGCGAGCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCT                                                                                                                                                        >  2:52616/1‑149
        CACCATGCACTGTCCCTTTTGCGGTGCCAACGACACCAAGGTCATGGACTCTCGCCTCGTCGCCGAGGGCGAGCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGCGCGTG                                                                                                                                                >  1:262306/1‑149
                                          ACCAAGGTCATCGACTCTCGCCTCGTCGCCGAGGGCGAGCATGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGCGCGTGCCGTCCTGCTTGATCAGCCGGGGCAGCACCAGCT                                                                                                              <  6:281703/149‑1
                                            CAAGGTCATCGACTCTCGCCTCGTCGCCGAGGGCGAGCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGCGCGTGCCGTCCTGCTTGATCAGCCGGGGCAGCACCAGCTCG                                                                                                            <  2:262306/149‑1
                                                         TCTCGCCTCGTCGCCGAGGGCGAGCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGCGCGTGCCGTCCTGCTTGATCAGCCGGGGCAGCACCAGC                                                                                                               >  1:93445/1‑133
                                                         TCTCGCCTCGTCGCCGAGGGCGAGCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGCGCGTGCCGTCCTGCTTGATCAGCCGGGGCAGCACCAGC                                                                                                               <  2:93445/133‑1
                                                                        GAGGGCGAGCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGGCGCGTGCCGTCCTGCTTGATCAGCCGGGGCAGCACTAG                                                                                                                >  8:52963/1‑117
                                                                                         CCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTG                                                                                                                                                       <  3:233073/61‑1
                                                                                         CCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTG                                                                                                                                                       >  4:233073/1‑61
                                                                                                                                                      GCGCGTGCCGTCCTGCTTGATCAGCCGGGGCAGCACCAGCTCGGCGGTTTCGAAGGTGGTGAAGCGCTCGCCGCAGGCCACGCATTCACGGCGGCGGCGCACCTGCTCGCCCTCGGCGACGAGGCGAGAGTCGATGACCTTGGTGTCGT  <  3:349423/149‑1
                                                                                                                                                                                                                                                                                                           
TTGCCTGCCACCATGCACTGTCCCTTTTGCGGTGCCAACGACACCAAGGTCATCGACTCTCGCCTCGTCGCCGAGGGCGAGCAGGTGCGCCGCCGCCGTGAATGCGTGGCCTGCGGCGAGCGCTTCACCACCTTCGAAACCGCCGAGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/600177‑600327
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggCGCGTGCCGTCCTGCTTGATCAGCCGGGGCAGCACCAGCTCGGCGGTTTCGAAGGTGGTGAAGCGCTCGCCGCAGGCCACGCATTCACGGCGGCGGCGCACCTGCTCGCCCTCGGCGACGAGGCGAGAGTCGATGACCTTGGTGTCGT  <  NC_002947/600361‑600214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.