| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 664472 | 59 (0.980) | 5 (0.090) | 5/252 | NT | 8.3% | coding (1338/4902 nt) | yfhM | lipoprotein |
| ? | NC_002947 | = 664499 | 54 (0.950) | coding (1365/4902 nt) | yfhM | lipoprotein | |||||
GGTGCTGCTCAACGGCCTGCTGCGCGACCAGGACGGCAAGCCGGTCAAAGCCCAGCCGGTGAGCGTGGAAGTGCGTCGCCCGGATGAACAGGTGAGCCGCAAGTTCGTCTGGGAAGCCGACAGCAATGGCTTGTACCAATACCAGTTGCAACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/664319‑664472‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaactgCCAACGGCCAGTCGGGGCCTCGGTGGCCAGTTGCAACTGGTATTGGTACAAGCCATTGCTGTCGGCTTCCCAGACGAACTTGCGGCTCACCTGTTCATCCGGGCGACGCACTTCCACGCTCACCGGCTGGGCTTTGACCGGCTTG < NC_002947/664499‑664355 GGTGCTGCTCAACGGCCTGCTGCGCGACCAGGACGGCAAGCCGGTCAAAGCCCAGCCGGTGAGCGTGGAAGTGCGTCGCCCGGATGAACAGGTGAGCCGCAAGTTCGTCTGGGAAGCCGACAGCGATGGCTTGTACCAATACCAGTTGC < 2:193696/149‑1 GCGACCAGGACGGCAAGCCGGTCAAAGCCCAGCCGGTGAGCGTGGAAGTGCGTCGCCCGGATGAACAGGTGAGCCGCAAGTTCGTCTGGGAAGCCGACAGCAATGGCTTGTACCAATACCAGTTGCAACTGCCAACGGCCAGTCGGGGC > 3:255710/1‑149 AAGCCGGTCAAAGCCCAGCCGGTGAGCGTGGAAGTGCGTCGCCCGGATGAACAGGTGAGCCGCAAGTTCGTCTGGGAAGCCGACAGCAATGGCTTGTACCAATACCAGTTGCAACTGCCAACGGCCAGTCGGGGCCTCGGTGGCCAGTT < 4:255710/149‑1 AGCCGGTCAAAGCCCAGCCGGTGAGCGTGGAAGTGCGTCGCCCGGATGAACAGGTGAGCCGCAAGTTCGTCTGGGAAGCCGACAGCAATGGCTTGTACCAATACCAGTTGCAACTGCCAACGGCCAGTCGGGGCCTCGGTGGCCAGTTG < 5:66572/149‑1 GGTCAAAGCCCAGCCGGTGAGCGTGGAAGTGCGTCGCCCGGATGAACAGGTGAGCCGCAAGTTCGTCTGGGAAGCCGACAGCAATGGCTTGTACCAATACCAGTTGCAACTGCCAACGGCCAGTCGGGGCCTCGGTGGCCAGTTGCAAC < 1:87611/149‑1 TCAAAGCCCAGCCGGTGAGCGTGGAAGTGCGTCGCCCGGATGAACAGGTGAGCCGCAAGTTCGTCTGGGAAGCCGACAGCAATGGCTTGTACCAATACCAGTTGCAACTGCCAACGGCCAGTCGGGGCCTCGGTGGCCAGTTGCAACTG < 7:140560/149‑1 CAACTGCCAACGGCCAGTCGGGGCCTCGGTGGCCAGTTGCAACTGGTATTGGTACAAGCCATTGCTGTCGGCTTCCCAGACGAACTTGCGGCTCAC < 3:204901/96‑1 CAACTGCCAACGGCCAGTCGGGGCCTCGGTGGCCAGTTGCAACTGGTATTGGTACAAGCCATTGCTGTCGGCTTCCCAGACGAACTTGCGGCTCAC > 4:204901/1‑96 ACTGCCAACGGCCAGTCGGTGCCTCGGTGGCCAGTTGCAACTGGTATTGGTACAAGCCATTGCTGTCGGCTTCCCAGACGAACTTGCGGCTCACCTGTTCATCCGGGCGACGCACTTCCACGCTCACCGGCTGGGCTTTGACCGGCTTG < 2:40355/149‑1 GGTGCTGCTCAACGGCCTGCTGCGCGACCAGGACGGCAAGCCGGTCAAAGCCCAGCCGGTGAGCGTGGAAGTGCGTCGCCCGGATGAACAGGTGAGCCGCAAGTTCGTCTGGGAAGCCGACAGCAATGGCTTGTACCAATACCAGTTGCAACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/664319‑664472‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaactgCCAACGGCCAGTCGGGGCCTCGGTGGCCAGTTGCAACTGGTATTGGTACAAGCCATTGCTGTCGGCTTCCCAGACGAACTTGCGGCTCACCTGTTCATCCGGGCGACGCACTTCCACGCTCACCGGCTGGGCTTTGACCGGCTTG < NC_002947/664499‑664355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |