| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 726134 | 61 (1.010) | 4 (0.070) | 4/250 | NT | 6.5% | coding (620/765 nt) | PP_0620 | GntR family transcriptional regulator |
| ? | NC_002947 | = 726163 | 57 (1.010) | coding (591/765 nt) | PP_0620 | GntR family transcriptional regulator | |||||
AGGCGCATCAGTGGTGGTGATCGAACTCCAGCAGGAAGTTACGGGCAACCTCGCCTTCCAGCGCGGTCATGTGGTGCTCGGCGTCGCACATGTGTTCGTGCATCAGCCGGCGTACGGCGGGTTCGTCGCTGGCGCGCAAGGCGGTCAGCAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/725982‑726134‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagttCGCCGCCGCCAACATCGGCTACCACAAGCAACTGCTGACCGCCTTGCGCGCCAGCGACGAACCCGCCGTACGCCGGCTGATGCACGAACACATGTGCGACGCCGAGCACCACATGACCGCGCTGGAAGGCGAGGTTGCCCG < NC_002947/726163‑726023 AGGCGCATCAGTGGTGGTGATCGAACTCCAGCAGGAAGTTACGGGCAACCTCGCCTTCCAGCGCGGTCATGTGGTGCTCGGCGTCGCACATGTGTTCGTGCATCAGCCGGCGTACGGCGGGTTCGTCGCTGGCGCGCAAGGCGGTCAG > 7:291492/1‑148 GGCGCATCAGTGGTGGTGATCGAACTCCAGCAGGAAGTTACGGGCAACCTCGCCTTCCAGCGCGGTCATGTGGTGCTCGGCGTCGCACATGTGTTCGTGCATCAGCCGGCGTACGGCGGGTTCGTCGCTGGCGCGCAAGGCGGTCAGCA < 8:244087/149‑1 GCGCATCAGTGGTGGTGATCGAACTCCAGCAGGAAGTTACGGGCAACCTCGCCTTCCAGCGCGGTCATGTGGTGCTCGGCGTCGCACATGTGTTCGTGCATCAGCCGGCGTACGGCGGGTTCGTCGCTGGCGCGCAAGGCGGTCAGCAG < 6:134541/149‑1 GCATCAGTGGTGGTGATCGAACTCCAGCAGGAAGTTACGGGCAACCTCGCCTTCCAGCGCGGTCATGTGGTGCTCGGCGTCGCACATGTGTTCGTGCATCAGCCGGCGTACGGCGGGTTCGTCGCTGGCGCGCAAGGCGGTCAGCAGTT < 6:70273/149‑1 CTCCAGCAGGAAGTTACGGGCAACCTCGCCTTCCAGCGCGGTCATGTGGTGCTCGGCGTCGCACATGTGTTCGTGCATCAGCCGGCGTACGGCGGGTTCGTCGCTGGCGCGCAAGGCGGTCAGCAGTTCGCCGCCGCCAACATCGGCTA > 2:28406/1‑149 TTACGGGCAACCTCGCCTTCCAGCGCGGTCATGTGGTGCTCGGCGTCGCACATGTGTTCGTGCATCAGCCGGCGTACGGCGGGTTCGTCGCTGGCGCGCAAGGCGGTCAGCAGTTCGCCGCCGCCAACATCGGCTACCACAAGCAACTG < 1:28406/149‑1 GGGCAACCTCGCCTTCCAGCGCGGTCATGTGGTGCTCGGCGTCGCACATGTGTTCGTGCATCAGCCGGCGTACGGCGGGTTCGTCGCTGGCGCGCAAGGCGGTCAGCAGTTCGCCGCCGCCAACATCGGCTACCACAAGCAACTGCTGA > 8:118109/1‑149 GGCAACCTCGCCTTCCAGCGCGGTCATGTGGTGCTCGGCGTCGCACATGTGTTCGTGCATCAGCCGGCGTACGGCGGGTTCGTCGCTGGCGCGCAAGGCGGTCAGCAGTTCGCCGCCGCCAACATCGGCTACCACAAGCAACTGCTGAC < 7:118109/149‑1 CAGCAGTTCGCCGCCGCCAACATCGGCTACCACAAGCAACTGCTGACCGCCTTGCGCGCCAGCGACGAACCCGCCGTACGCCGGCTGATGCACGAACACATGTGCGACGCCGAGCACCACATGACCGCGCTGGAAGGCGAGGTTGCCCG > 2:348214/1‑149 AGGCGCATCAGTGGTGGTGATCGAACTCCAGCAGGAAGTTACGGGCAACCTCGCCTTCCAGCGCGGTCATGTGGTGCTCGGCGTCGCACATGTGTTCGTGCATCAGCCGGCGTACGGCGGGTTCGTCGCTGGCGCGCAAGGCGGTCAGCAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/725982‑726134‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagttCGCCGCCGCCAACATCGGCTACCACAAGCAACTGCTGACCGCCTTGCGCGCCAGCGACGAACCCGCCGTACGCCGGCTGATGCACGAACACATGTGCGACGCCGAGCACCACATGACCGCGCTGGAAGGCGAGGTTGCCCG < NC_002947/726163‑726023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |