| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 745418 | NA (NA) | 3 (0.050) | 3/252 | NT | NA | coding (1081/1533 nt) | PP_0637 | transposase |
| ? | NC_002947 | = 745462 | NA (NA) | coding (1037/1533 nt) | PP_0637 | transposase | |||||
TTTGCCAGGTAAAGCACCGCCTTGCCCAGTACGCTTTGCGGTGTCACCTGTGAGTGCGTCTTGTCGAGCCAACTTTTCAACTGCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAGGTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/745264‑745418‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgcgCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAGCAGTTGAAAAGTTGGCTCGACAAGACGCACT < NC_002947/745462‑745316 TTTGCCAGGTAAAGCACCGCCTTGCCCAGTACGCTTTGCGGTGTCACCTGTGAGTGCGTCTTGTCGAGCCAACTTTTCAACTGCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAG < 6:301116/149‑1TTTGCCAGGTAAAGCACCGCCTTGCCCAGTACGCTTTGCGGTGTCACCTGTGAGTGCGTCTTGTCGAGCCAACTTTTCAACTGCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAG > 6:212806/1‑149TTTGCCAGGTAAAGCACCGCCTTGCCCAGTACGCTTTGCGGTGTCACCTGTGAGTGCGTCTTGTCGAGCCAACTTTTCAACTGCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAG > 5:31583/1‑149TTTGCCAGCTTAAGCACGGCCTTGCCCAGTACGCTGTGCTGTGTCACCTGTGAGTGCGTCTGGTCGAGCCAACTTTTCAACTTCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAG < 8:281853/149‑1 GCCAGGTAAAGCACCGCCTTGCCCAGTACGCTTTGCGGTGTCACCTGTGAGTGCGTCTTGTCGAGCCAACTTTTCAACTGCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAGGTC > 5:65616/1‑149 CCAGGTAAAGCACCGCCTTGCCCAGTACGCTTTGCGGTGTCACCTGTGAGTGCGTCTTGTCGAGCCAACTTTTCAACTGCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAGGTCG < 5:16370/149‑1 CCAGGTAAAGCACCGCCTTGCCCAGTACGCTTAGCGGTGTCACCTGTGAGTGCGTCTTGTCGAGCCAACTATTCAACTGCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAGGTCG > 7:124776/1‑149 AGGTAAAGCACCGCCTTGCCCAGTACGCTTTGCGGTGTCACCTGTGAGTGCGTCTTGTCGAGCCAACTTTTCAACTGCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAGGTCGCG > 6:236625/1‑149 CAGTACGCTTTGCGGTGTCACCTGTGAGTGCGTCTTGTCGAGCCAACTTTTCAACTGCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAGGTCG > 4:361865/1‑127 CAGTACGCTTTGCGGTGTCACCTGTGAGTGCGTCTTGTCGAGCCAACTTTTCAACTGCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAGGTCG < 3:361865/127‑1 GTCGAGCCAACTTTTCAACTGCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAGGTCGCGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAA < 5:227256/148‑1 TCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAGGTCGCGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTC > 7:79129/1‑124 TCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAGGTCGCGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTC < 8:79129/124‑1 GTCGCGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAGCAGTTGAAAAGTTGGCTCGACAAGACG > 6:384955/1‑149 GTCGCGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAGCAGTTGAAAAGTTGGCTCGACAAGACG > 6:65616/1‑149 GCGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAGCAGTTGAAAAGTTGGCTCGACAAGACGCAC < 5:197483/149‑1 GCGCAGATGTTGCGCTGACTATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGACGATCCTTGAGCAGTAGAAAAGTAGGCTCGACAAGACGCAC > 6:225537/1‑149 CGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAGCAGTTGAAAAGTTGGCTCGACAAGACGCACT < 4:67906/149‑1 GCCGATGTTGCGCTGACGATGATTAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAGCAGTTGAAAAGTTGGCTCGACAAGACGCACT > 5:238774/1‑148 GCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAGCAGTTGAAAAGTTGGCTCGACAAGACGCACT > 6:101167/1‑148 TTTGCCAGGTAAAGCACCGCCTTGCCCAGTACGCTTTGCGGTGTCACCTGTGAGTGCGTCTTGTCGAGCCAACTTTTCAACTGCTCAAGGATCGGCAGGCTTCGTTCCTGACGACCGATGAATCGCTGTTCATCGCTGGCATCCTTGAGGTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/745264‑745418‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgcgCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAGCAGTTGAAAAGTTGGCTCGACAAGACGCACT < NC_002947/745462‑745316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |