| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1004433 | 66 (1.100) | 5 (0.090) | 4/254 | NT | 7.3% | coding (458/987 nt) | PP_0866 | transmembrane sensor |
| ? | NC_002947 | = 1004455 | 64 (1.110) | coding (480/987 nt) | PP_0866 | transmembrane sensor | |||||
TGGCGCTGGGCCTGGGCTGGAGCGGCTGGCACCACCTGCAACTGAACCATCAGGGCAGCCTGCAGACGGCCTTCAATGAGCGCCGTCAGGTCGAACTGCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1004280‑1004433‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcagGCGCACGTGCCGCTGGCCGGCGCTGAACTCGACCTGCAACTGCGTGTTGCCATTGAGCTCCAGATGCGAGCCATCCGGCAGTTCGACCTGACGGCGCTCATTGAAGGCCGTCTGCAGGCTGCCCTGATGGTTCAGTTGCAGGTGGTG < NC_002947/1004455‑1004309 gGGCGCTGGGCCTGGGCTGGAGCGGCTGGCACCACCTGCAACTGAACCATCAGGGCAGCCTGCAGACGGCCTTCAATGAGCGCCGTCAGGTCGAACTGCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAG < 6:354885/148‑1TGGCGCTGGGCCTGGGCTGGAGCGGCTGGCACCACCTGCAACTGAACCATCAGGGCAGCCTGCAGACGGCCTTCAATGAGCGCCGTCAGGTCGAACTGCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAG < 7:341403/149‑1 GCGCTGGGCCTGGGCTGGAGCGGCTGGCACCACCTGCAACTGAACCATCAGGGCAGCCTGCAGACGGCCTTCAATGAGCGCCGTCAGGTCGAACTGCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTT > 7:136660/1‑149 CGCTGGGCCTGGGCTGGAGCGGCTGGCACCACCTGCAACTGAACCATCAGGGCAGCCTGCAGACGGCCTTCAATGAGCGCCGTCAGGTCGAACTGCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTC < 5:320023/149‑1 GCTGGGCCTGGGCTGGAGCGGCTGGCACCACCTGCAACTGAACCATCAGGGCAGCCTGCAGACGGCCTTCAATGAGCGCCGTCAGGTCGAACTGCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCA < 3:41647/149‑1 CCTGCAACTGAACCATCAGGGCAGCCTGCAGACGGCCTTCAATGAGCGCCGTCAGGTCGAACTGCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGGCGCACGTGCCGCTGGCCGGCGCTGAACT < 5:267321/149‑1 ACTGAACCATCAGGGCAGCCTGCAGACGGCCTTCAATGAGCGCCGTCAGGTCGAACTGCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGGCGCACGTGCCGCTGGCCGGCGCTGAACTCG < 5:234347/145‑1 ACTGAACCATCAGGGCAGCCTGCAGACGGCCTTCAATGAGCGCCGTCAGGTCGAACTGCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGGCGCACGTGCCGCTGGCCGGCGCTGAACTCG > 6:234347/1‑145 ATCAGGGCAGCCTGCAGACGGCCTTCAATGAGCGCCGTCAGGTCGAACTGCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGGCGCACGTGCCGCTGGCCGGCGCTGAACTCG < 1:175821/137‑1 ATCAGGGCAGCCTGCAGACGGCCTTCAATGAGCGCCGTCAGGTCGAACTGCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGGCGCACGTGCCGCTGGCCGGCGCTGAACTCG > 2:175821/1‑137 caccGTTCCGGCGCACGTGCCGCTCGCCGGCGCTGAACTCGACCTGCAACTGCGTGTTGCCATTGACCTCCAGATGCGAGCCATCCGGCAGTTCGACCTGACGGCGCTCATTGAAGGCCGTCTGCAGGCTGCCCTGATGGTTCAGTTGC < 6:105132/145‑1 AGGCGCACGTGCCGCTGGCCGGCGCTGAACTCGACCTGCAACTGCGTGTTGCCATTGAGCTCCAGATGCGAGCCATCCGGCAGTTCGACCTGACGGCGCTCATTGAAGGCCGTCTGCAGGCTGCCCTGATGGTTCAGTTGCAGGTGGTG > 5:2180/1‑149 TGGCGCTGGGCCTGGGCTGGAGCGGCTGGCACCACCTGCAACTGAACCATCAGGGCAGCCTGCAGACGGCCTTCAATGAGCGCCGTCAGGTCGAACTGCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1004280‑1004433‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcagGCGCACGTGCCGCTGGCCGGCGCTGAACTCGACCTGCAACTGCGTGTTGCCATTGAGCTCCAGATGCGAGCCATCCGGCAGTTCGACCTGACGGCGCTCATTGAAGGCCGTCTGCAGGCTGCCCTGATGGTTCAGTTGCAGGTGGTG < NC_002947/1004455‑1004309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |