New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1094111 =	64 (1.060)	7 (0.120)	6/254	NT	10.8%	coding (56/465 nt)	ptsN	phosphotransferase system subunit IIA
	?	NC_002947	1094140 =	54 (0.940)					coding (27/465 nt)	ptsN	phosphotransferase system subunit IIA

ACGCCTTGGCCGACAAGCTCGACCGCCAACTGAAAAAACACAAGGAAAAACAGCAAAGCCTGCTGCAAGGTGCAGCTGCCCGCTGATCCCCCTCATCCATGATCCGACTTGAAACCATCCTGACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1094264‑1094111 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggGGTCAGGATGGTTTCAAGTCGGATCATGGATGAGGGGGATCAGCGGGCAGCTGCACCTTGCAGCAGGCTTTGCTGTTTTTCCTTGTGTTTTTTCAGTTGGCGGTCGAGCTTGTCGGCCAAG  >  NC_002947/1094140‑1094260                                                                                                                                                                                                                                                                                      ACGCCTTGGCCGACAAGCTCGACCGCCAACTGAAAAAACACAAGGAAAAACAGCAAAGCCTGCTGCAAGGTGCAGCTGCCCGCTGATCCCCCTCATCCATGATCCGACTTGAAACCATCCTGACCCCCGGC‑CGTTCCCTCGTGAACGTG                                                                                                                                >  2:230867/1‑149   GCCTTGGCCGACAAACTCGACCGCCAACTGAAAAAACACAAGGAAAAACAGCAAAGCCTGCTGCAAGGTGCAGCTGCCCGCTGATCCCCCTCATCCATGATCCGACTTGAAACCATCCTGACCCCCGGC‑CGTTCCCGCGTGAACGTGCC                                                                                                                              >  8:330710/1‑149    CCTTGGCCGACAAGCTCGACCGCCAACTGAAAAAACACAAGGAAAAACAGCAAAGCCTGCTGCAAGGTGCAGCTGCCCGCTGATCCCCCTCATCCATGATCCGACTTGAAACCATCCTGACCCCCGGC‑CGTTCCCTCGTGAACGTGCCG                                                                                                                             <  6:44165/149‑1     CTTGGCCGACAAGCTCGACCGCCAACTGAAAAAACACAAGGAAAAACAGCAAAGCCTGCTGCAAGGTGCAGCTGCCCGCTGATCCCCCTCATCCATGATCCGACTTGAAACCATCCTGACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGG                                                                                                                            >  1:71998/1‑149     CTTGGCCGACAAGCTCGACCGCCAACTGAAAAAACACAAGGAAAAACAGCAAAGCCTGCTGCAAGGTGCAGCTGCCCGCTGATCCCCCTCATCCATGATCCGACTTGAAACCATCCTGACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGG                                                                                                                            >  5:348329/1‑149                AGCTCGACCGCCAACTGAAAAAACACAAGGAAAAACAGCAAAGCCTGCTGCAAGGTGCAGCTGCCCGCTGATCCCCCTCATCCATGATCCGACTTGAAACCATCCTGACTCCCGGCACGTTCACGAGGGAACG‑GCCGGGGGTCAGGATG                                                                                                                 <  8:85150/149‑1                  CTCGACCGCCAACTGAAAAAACACAAGGAAAAACAGCAAAGCCTGCTGCAAGGTGCAGCTGCCCGCTGATCCCCCTCATCCATGATCCGACTTGAAACCATCCTGACCCCCGGCACGTTCACGAGGGAACG‑GCCGGGGGTCAGGATGGT                                                                                                               <  3:275496/149‑1                                                                                                             TTGAAACCATCCTGACCCCCGGC‑CGTTCCCTCGTGCACGTGCCGGGAGGCAGGATGGTTTCCAGTCGGATCAGGGATGAGGGGGATCAGCGGGCAGCTGCACCTGGCAGCAGGCGTTGCAGGTTTTCCTGGTGTTTTTTCAGTTGGCGG                    >  5:371289/1‑149                                                                                                                               CCGGC‑CGTTCCCTCGTGAACGTGCCGGGGGTCAGGATGGTTTCAAGTCGGATCATGGATGAGGGGGATCAGCGGGCAGCTGCACCTTGCAGCAGGCTTTGCTGTTTTTCCTTGTGTTTTTTCAGTTGGCGGTCGAGCTTGTCGGCCAAG  >  5:47937/1‑149                                                                                                                               CCGGC‑CGTTCCCTCGTGAACGTGCCGGGGGTCAGGATGGTTTCAAGTCGGATCATGGATGAGGGGGATCAGCGGGCAGCTGCACCTTGCAGCAGGCTTTGCTGTTTTTCCTTGTGTTTTTTCAGTTGGCGGTCGAGCTTGTCGGCCAAG  >  7:324737/1‑149                                                                                                                                CGGC‑CGTTCCCTCGTGAACGTGCCGGGGGTCAGGATGGTTTCAAGTCGGATCATGGATGAGGGGGATCAGCGGGCAGCTGCACCTTGCAGCAGGCTTTGCTGTT                                              <  5:24113/104‑1                                                                                                                                CGGC‑CGTTCCCTCGTGAACGTGCCGGGGGTCAGGATGGTTTCAAGTCGGATCATGGATGAGGGGGATCAGCGGGCAGCTGCACCTTGCAGCAGGCTTTGCTGTT                                              >  6:24113/1‑104                                                                                                                                                                                                                                                                                      ACGCCTTGGCCGACAAGCTCGACCGCCAACTGAAAAAACACAAGGAAAAACAGCAAAGCCTGCTGCAAGGTGCAGCTGCCCGCTGATCCCCCTCATCCATGATCCGACTTGAAACCATCCTGACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1094264‑1094111 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggGGTCAGGATGGTTTCAAGTCGGATCATGGATGAGGGGGATCAGCGGGCAGCTGCACCTTGCAGCAGGCTTTGCTGTTTTTCCTTGTGTTTTTTCAGTTGGCGGTCGAGCTTGTCGGCCAAG  >  NC_002947/1094140‑1094260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.