| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1174505 = | 57 (0.950) | 4 (0.070) | 4/256 | NT | 6.7% | coding (383/756 nt) | PP_1029 | membrane protein |
| ? | NC_002947 | 1174546 = | 57 (0.980) | coding (424/756 nt) | PP_1029 | membrane protein | |||||
AGCTGATCAGCGCGCTCTGGGTGGCGCGTACCTGTTCCTTCACCTCCAGCCGTGCGCTCAGGTAAAGGGCATAAAGAAACCCGCCGCTGCCGAACAAAGCCCCGAACAAACCGCCTGCCGTGCCCATCGGCACCGCCCAGAAGCCGGACAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1174657‑1174505‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcGGTTTGTTCGGGGCTTTGTTCGGCAGCGGCGGGTTTCTTTATGCCCTTTACCTGAGCGCACGGCTGGAGGTGAAGGAACAGGTACGCGCCACCCAGAGCGCGCTGATCAGCTGCAGTACGATAGTGCGTCTGTCGCTGTTCCTGA > NC_002947/1174546‑1174690 AGCTGATCAGCGCGCTCTGGGTGGCGCGTACCTGTTCCTTCACCTCCAGCCGTGCGCTCAGGTAAAGGGCATAAAGAAGCCCGCCGCTGCCGAACAAAGCCCCGAACAAACCGCCTGCCGTGCCCATCGGCACCGCCCAGAAGCCGGAC < 6:188545/149‑1 AAACCGCCTGCCGTGCCCATCGGCACCGCCCAGAAGCCGGACAGGCGGTTTGTTCGGGGCTTTGTTCGGCAGCGGCGGGTTTCTTTATGCCCTTTACCTGAGCGCACGGCTGGAGGTGAA > 5:30037/1‑120 AAACCGCCTGCCGTGCCCATCGGCACCGCCCAGAAGCCGGACAGGCGGTTTGTTCGGGGCTTTGTTCGGCAGCGGCGGGTTTCTTTATGCCCTTTACCTGAGCGCACGGCTGGAGGTGAA < 6:30037/120‑1 ACCGCCTGCCGTGCCCATCGGCACCGCCCAGAAGCCGGACAGGCGGTTTGTTCGGGGCTTTGTTCGGCAGCGGCGGGTTTCTTTATGCCCTTTACCTGAGCGCACGGCTGGAGGTGAAGGAACAGGTACGCGCCACCCAGAGCGCGCT > 7:61389/1‑148 AGAAGCCGGACAGGCGGTTTGTTCGGGGCTTTGTTCGGCAGCGGCGGGTTTCTTTATGCCCTTTACCTGAGCGCACGGCTGGAGGTGAAGGAACAGGTACGCGCCACCCAGAGCGCGCTGATCAGCTGCAGTACGATAGTGCGTCTGTC < 8:61389/149‑1 AGGCGGTTTGTTCGGGGCTTTGTTCGGCAGCGGCGGGTTTCTTTATGCCCTTTACCTGAGCGCACGGCTGGAGGTGAAGGAACAGGTACGCGCCACCCAGAGCGCGCTGATCAGCTGCAGTACGATAGTGCGTCTGTCGCTGTTCCTGA < 3:199848/149‑1 AGCTGATCAGCGCGCTCTGGGTGGCGCGTACCTGTTCCTTCACCTCCAGCCGTGCGCTCAGGTAAAGGGCATAAAGAAACCCGCCGCTGCCGAACAAAGCCCCGAACAAACCGCCTGCCGTGCCCATCGGCACCGCCCAGAAGCCGGACAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1174657‑1174505‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcGGTTTGTTCGGGGCTTTGTTCGGCAGCGGCGGGTTTCTTTATGCCCTTTACCTGAGCGCACGGCTGGAGGTGAAGGAACAGGTACGCGCCACCCAGAGCGCGCTGATCAGCTGCAGTACGATAGTGCGTCTGTCGCTGTTCCTGA > NC_002947/1174546‑1174690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |