New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1251003 = | 58 (0.960) | 3 (0.050) | 3/250 | NT | 5.8% | coding (268/549 nt) | PP_1093 | electron transport complex protein |
? | NC_002947 | 1251054 = | 43 (0.760) | coding (217/549 nt) | PP_1093 | electron transport complex protein |
GCGCAGTACTGATGGGGTGCCTGCACCAACTGTTGCTGGCGCCACTGCGTAAACACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1251158‑1251003 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggccaAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGTGGCAC > NC_002947/1251054‑1251200 GCGCAGTACTGATGGGGTGCCTGCACCAACTGTTGCTGGCGCCACTGCGTAAACACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCA < 6:221478/149‑1 GCAGTACTGATGGGGTGCCTGCACCAACTGTTGCTGGCGCCACTGCGTAAACACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACT > 6:18318/1‑149 GCAGTACTGATGGGGTGCCTGCACCAACTGTTGCTGGCGCCACTGCGTAAACACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACT > 7:112680/1‑149 TACTGATGGGGTGCCTGCACCAACTGTTGCTGGCGCCACTGCGTAAACACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGC > 2:312423/1‑148 CCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCAT > 6:2991/1‑148 CTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCA < 1:313977/149‑1 CTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCAT > 2:313977/1‑147 TGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGG < 3:111534/123‑1 TGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGG > 4:111534/1‑123 CCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGTGagc > 7:212352/1‑146 CCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGTGGCA < 6:375411/149‑1 CCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGTGGCA > 8:345807/1‑149 CCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGT < 8:212352/145‑1 AAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGTGGCAC < 3:358434/148‑1 AAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGTGGCAC > 4:358434/1‑148 GCGCAGTACTGATGGGGTGCCTGCACCAACTGTTGCTGGCGCCACTGCGTAAACACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1251158‑1251003 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggccaAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGTGGCAC > NC_002947/1251054‑1251200 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |