| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1438266 = | 70 (1.160) | 4 (0.070) | 4/252 | NT | 6.1% | coding (1404/1614 nt) | yveA | aspartate‑proton symporter |
| ? | NC_002947 | 1438317 = | 57 (1.000) | coding (1353/1614 nt) | yveA | aspartate‑proton symporter | |||||
CCGTGTCGTGGCTGCTGGCCCTGCAGATCGTGATGTTCGTGCTGTACCTGCTGTGCAGCCGTTTCGTACCCACCCAGCACCTGTCGCTGGGTCAGCAAGTTCGCTCGTCGGCCTGGCTGATCGGCTTCTACGCGCTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1438405‑1438266‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaccCAGCGACAGGTGCTGGGTGGGTACGAAACGGCTGCACAGCAGGTACAGCACGAACATCACGATCTGCAGGGCCAGCAGCCACGACACGGTGTTCCAGCCCGACCAGTACACGATCAGCGCAGCGATGATGAACGACAGCGGGCCGAGC > NC_002947/1438317‑1438464 CCGTGTCGTGGCTGCTGGCCCTGCAGATCGTGATGTTCGTGCTGTACCTGCTGTGCAGCCGTTTCGTACCCACCCAGCACCTGTCGCTGGGTCAGCAAGTTCGCTCGTCGGCCTGGCTGATCGGCTTCTACGCGC > 7:5642/1‑135CCGTGTCGTGGCTGCTGGCCCTGCAGATCGTGATGTTCGTGCTGTACCTGCTGTGCAGCCGTTTCGTACCCACCCAGCACCTGTCGCTGGGTCAGCAAGTTCGCTCGTCGGCCTGGCTGATCGGCTTCTACGCGC < 8:5642/135‑1 GGGTCAGCAAGTTCGCTCGTCGGCCTGGCTGATCGGCTTCTACGCGCTGACCCAGCGACAGGTGCTGGGTGGGTACGAAACGGCTGCACAGCAGGTACAGCACGAACATCACGATCTGCAGGGCCAGCAGCCACGACACGGTGTTCCAG > 2:328539/1‑149 GTCAGCAAGTTCGCTCGTCGGCCTGGCTGATCGGCTTCTACGCGCTGACCCAGCGACAGGTGCTGGGTGGGTACGAAACGGCTGCACAGCAGGTACAGCACGAACATCACGATCTGCAGGGCCAGCAGCCACGACACGGTGTTCCAGCC > 4:319951/1‑149 CAAGTTCGCTCGTCGGCCTGGCTGATCGGCTTCTACGCGCTGACCCAGCGACAGGTGCTGGGTGGGTACGAAACGGCTGCACAGCAGGTACAGCACGAACATCACGATCTGCAGGGCCAGCAGCCACGACACGGTGTTCCAGCCCGACC < 3:319951/149‑1 ATCGGCTTCTACGCGCTGACCCAGCGACAGGTGCTGGGTGGGTACGAAACGGCTGCACAGCAGGTACAGCACGAACATCACGATCTGCAGGGCCAGCAGCCACGACACGGTGTTCCAGCCCGACCAGTACACGATCAGCGCAGCGAT < 1:328539/147‑1 ACCCAGCGACAGGTGCTGGGTGGGTACGAAACGGCTGCACAGCAGGTACAGCACGAACATCACGATCTGCAGGGCCAGCAGCCACGACACGGTGTTCCAGCCCGACCAGTACACGATCAGCGCAGCGATGATGAACGACAGCGGGCCGA < 8:41072/149‑1 ACCCAGCGACAGGTGCTGGGTGGGTACGAAACGGCTGCACAGCAGGTACAGCACGAACATCACGATCTGCAGGGCCAGCAGCCACGACACGGTGTTCCAGCCCGACCAGTACACGATCAGCGCAGCGATGATGAACGACAGCGGGCC > 5:229869/1‑147 CCAGCGACAGGTGCTGGGTGGGTACGAAACGGCTGCACAGCAGGTACAGCACGAACATCACGATCTGCAGGGCCAGCCGCCACGACACGGTGTTCCAGCCCGCCCAGTACCCGATCAGCGCAGCGATGATGAACGACAGCGGGCCGAGC > 2:125892/1‑149 CCAGCGACAGGTGCTGGGTGGGTACGAAACGGCTGCACAGCAGGTACAGCACGAACATCACGATCTGCAGGGCCAGCAGCCACGACACGGTGTTCCAGCCCGACCAGTACACGATCAGCGCAGCGATGATGAACGACAGCGGGCCGAG > 6:120055/1‑148 CCGTGTCGTGGCTGCTGGCCCTGCAGATCGTGATGTTCGTGCTGTACCTGCTGTGCAGCCGTTTCGTACCCACCCAGCACCTGTCGCTGGGTCAGCAAGTTCGCTCGTCGGCCTGGCTGATCGGCTTCTACGCGCTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1438405‑1438266‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaccCAGCGACAGGTGCTGGGTGGGTACGAAACGGCTGCACAGCAGGTACAGCACGAACATCACGATCTGCAGGGCCAGCAGCCACGACACGGTGTTCCAGCCCGACCAGTACACGATCAGCGCAGCGATGATGAACGACAGCGGGCCGAGC > NC_002947/1438317‑1438464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |