New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1716345 =	65 (1.080)	5 (0.090)	5/256	NT	8.1%	coding (461/690 nt)	PP_1511	hypothetical protein
	?	NC_002947	1716429 =	51 (0.880)					coding (545/690 nt)	PP_1511	hypothetical protein

CGTGCTGAAGCTCTCGCAAGCGGCCTGCTGCACCTGACGCAAGAATTCCGCCTTCTGCCCGCCCGCCTGCCAGTCACGCGCCAGGATAATGCGCTGGCCGTCCTTCAGGCGAAAACCGCTGATGTCCAGCGCATTGGCC‑GTGGCGTG‑CTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1716496‑1716345 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGC  >  NC_002947/1716429‑1716575                                                                                                                                                                                                                                                                                                               CGTGCTGAAGCTCTCGCAAGCGGCCTGCTGCACCTGACGCAAGAATTCCGCCTTCTGCCCGCCCGCCTGCCAGTCACGCGCCAGGATAATGCGCTGGCCGTCCTTCAGGCGAAAACCGCTGATGTCCAGCGCATTGGCC‑GTGGCGTG‑CT                                                                                                                                                        >  3:50334/1‑149                                                                     GCCAGTCACGCGCCAGGATAATGCGCTGGCCGTCCTTCAGGCGAAAACCGCTGATGTCCAGCGCATTGGCC‑GTGGCGTG‑CTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAG                                                                                     <  7:9688/148‑1                                                                     GCCAGTCACGCGCCAGGATAATGCGCTGGCCGTCCTTCAGGCGAAAACCGCTGATGTCCAGCGCATTGGCC‑GTGGCGTG‑CTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAG                                                                                     >  8:9688/1‑148                                                                      CCAGTCACGCGCCAGGATAATGCGCTGGCCGTCCTTCAGGCGAAAACCGCTGATGTCCAGCGCATTGGCC‑GTGGCGTG‑CTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCA                                                                                   >  3:325780/1‑149                                                                                          TGCGCTGGCCGTCCTTCAGGCGAAAACCGCTGATGTCCAGCGCATTATCCTGGCGCGTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGAT                                                                  >  3:186275/1‑148                                                                                                               GAAAACCGCTGATGTCCAGCGCATTGGCC‑GTGGCGTG‑CTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCAC                                          <  4:325780/149‑1                                                                                                                                                         GCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGC  >  3:322983/1‑149                                                                                                                                                                                                                                                                                                               CGTGCTGAAGCTCTCGCAAGCGGCCTGCTGCACCTGACGCAAGAATTCCGCCTTCTGCCCGCCCGCCTGCCAGTCACGCGCCAGGATAATGCGCTGGCCGTCCTTCAGGCGAAAACCGCTGATGTCCAGCGCATTGGCC‑GTGGCGTG‑CTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1716496‑1716345 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGC  >  NC_002947/1716429‑1716575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.