| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1727167 | 60 (1.000) | 4 (0.070) | 4/250 | NT | 6.7% | coding (997/2487 nt) | plsB | glycerol‑3‑phosphate acyltransferase |
| ? | NC_002947 | = 1727224 | 55 (0.970) | coding (940/2487 nt) | plsB | glycerol‑3‑phosphate acyltransferase | |||||
CGGGAAGCCCTTGGTGTACAGGGTGTGCAGGTACTCGTTGAACACTGCCGTGTAAAGCGGGTTGCCCTTGAACGTGCGGCGCATGAAGAAGGCGCCACCACGGCGTAGCAGGTTACCGACCACCGGCATGTTGAGGTTGATGCCTGCAGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1727015‑1727167‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagccacATCGACTACCTGCTGCTGTCGTACCTGCTGTTCCGCAACGGCCTCACCCCGCCGCACGTGGCTGCAGGCATCAACCTCAACATGCCGGTGGTCGGTAACCTGCTACGCCGTGGTGGCGCCTTCTTCATGCGCCGCACGTTCAAGG < NC_002947/1727224‑1727080 CGGGAAGCCCTTGGTGTACAGGGTGTGCAGGTACTCGTTGAACACTGCCGTGTAAAGCGGGTTGCCCTTGAACGTGCGGCGCATGAAGAAGGCGCCACCACGGCGTAGCAGGTTACCGACCACCGGCATGTTGAGGTTGATGCCTGCAG > 5:171478/1‑149 TGCCGTGTAAAGCGGGTTGCCCTTGAACGTGCGGCGCATGAAGAAGGCGCCACCACGGCGTAGCAGGTTACCGACCACCGGCATGTTGAGGTTGATGCCTGCAGCCACATCGACTACCTGCTGCTGTCGTACCTGCTGTTCCGCAACGG > 4:93867/1‑149 CCTTGAACGTGCGGCGCATGAAGAAGGCGCCACCACGGCGTAGCAGGTTACCGACCACCGGCATGTTGAGGTTGATGCCTGCAGCCACATCGACTACCTGCTGCTGTCGTACCTGCTGTTCCGCAACGGCCTCACCCCGCCGCACGTGG < 3:93867/149‑1 CCTTGAACGTGCGGCGCATGAAGAAGGCGCCACCACGGCGTAGCAGGTTACCGACCACCGGCATGTTGAGGTTGATGCCTGCAGCCACATCGACTACCTGCTGCTGTCGTACCTGCTGTTCCGCAACGGCCTCACCCCGCCGCACGTGG > 6:350276/1‑149 ACGTGCGGCGCATGAAGAAGGCGCCACCACGGCGTAGCAGGTTACCGACCACCGGCATGTTGAGGTTGATGCCTGCAGCCACATCGACTACCTGCTGCTGTCGTACCTGCTGTTCCGCAACGGCCTCACCCCGCCGCACGTGGCTGCAG < 5:350276/149‑1 GCCACATCGACTACCTGCTGCTGTCGTACCTGCTGTTCCGCAACGGCCTCACCCCGCCGCACGTGGCTGCAGGCATCAACCTCAACATGCCGGTGGTCGGTAACCTGCTACGCCGTGGTGGCGCCTTCTTCATGCGCCGCACGTTCAAG < 4:370172/149‑1 CCACATCGACTACCTGCTGCTGTCGTACCTGCTGTTCCGCAACGGCCTCACCCCGCCGCACGTGGCTGCAGGCATCAACCTCAACATGCCGGTGGTCGGTAACCTGCTACGCCGTGGTGGCGCCTTCTTCATGCGCCGCACGTTCAAGG > 6:171478/1‑149 CCACATCGACTACCTGCTGCTGTCGTACCTGCTGTTCCGCAACGGCCTCACCCCGCCGCACGTGGCTGCAGGCATCAACCTCAACATGCCGGTGGTCGGTAACCTGCTACGCCGTGGTGGCGCCTTCTTCATGCGCCGCACGTTCAAGG > 8:286737/1‑149 CGGGAAGCCCTTGGTGTACAGGGTGTGCAGGTACTCGTTGAACACTGCCGTGTAAAGCGGGTTGCCCTTGAACGTGCGGCGCATGAAGAAGGCGCCACCACGGCGTAGCAGGTTACCGACCACCGGCATGTTGAGGTTGATGCCTGCAGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1727015‑1727167‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagccacATCGACTACCTGCTGCTGTCGTACCTGCTGTTCCGCAACGGCCTCACCCCGCCGCACGTGGCTGCAGGCATCAACCTCAACATGCCGGTGGTCGGTAACCTGCTACGCCGTGGTGGCGCCTTCTTCATGCGCCGCACGTTCAAGG < NC_002947/1727224‑1727080 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |