New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1781578 =	55 (0.910)	3 (0.050)	3/258	NT	5.1%	coding (2499/2703 nt)	glnD	uridylyltransferase
	?	NC_002947	1781619 =	58 (0.990)					coding (2458/2703 nt)	glnD	uridylyltransferase

CCCGACCATCATCCAGCGCCGGGTACCGCGGCAGCTCAAGCACTTCGACTTCCCGCCGCAAGTGACCATCCTCAACGATGCCCAGCGGCCGGTGACCATCCTCGAAATCACCGCGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1781728‑1781578 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggTGATTTCGAGGATGGTCACCGGCCGCTGGGCATCGTTGAGGATGGTCACTTGCGGCGGGAAGTCGAAGTGCTTGAGCTGCCGCGGTACCCGGCGCTGGATGATGGTCGG  >  NC_002947/1781619‑1781727                                                                                                                                                                                                                                                                      CCCGACCATCATCCAGCGCCGGGTACCGCGGCAGCTCAAGCACTTCGACTTCCCGCCGCAAGTGACCATCCTCAACGATGCCCAGCGGCCGGTGACCATCCTCGAAATCACCGCGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGC                                                                                                                 >  7:39026/1‑149                         ACCGCGGCAGCTCAAGCACTTCGACTTCCCGCCGCAAGTGACCATCCTCAACGATGCCCAGCGGCCGGTGACCATCCTCGAAATCACCGCGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGCGG                                                                                                               <  5:272470/127‑1                         ACCGCGGCAGCTCAAGCACTTCGACTTCCCGCCGCAAGTGACCATCCTCAACGATGCCCAGCGGCCGGTGACCATCCTCGAAATCACCGCGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGCGG                                                                                                               >  6:272470/1‑127                                                                                                             CACCGCGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGCGGTGATTTCGAGGATGGTCACCGGCCGCTGGGCATCGTTGAGGATGGTCACTTGCGGCGGGAAGTCGAAGTGCTTGAGCTGCCGCGGTACCCGGCGATGGATGATGG      >  8:344556/1‑148                                                                                                               CCGCGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGCGGTGATTTCGAGGATGGTCACCGGCCGCTGGGCATCGTTGAGGATGGTCACTTGCGGCGGGAAGTCGAAGTGCTTGAGCTGCCGCGGTACCCGGCGCTGGATGATGGTCG   >  2:16649/1‑149                                                                                                                CGCGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGCGGTGATTTCGAGGATGGTCACCGGCCGCTGGGCATCGTTGAGGATGGTCACTTGCGGCGGGAAGTCGAAGTGATTGAGCTGCCGCGGTACCAGGCGCTGGATGATGGTCGG  >  8:273851/1‑149                                                                                                                                                                                                                                                                      CCCGACCATCATCCAGCGCCGGGTACCGCGGCAGCTCAAGCACTTCGACTTCCCGCCGCAAGTGACCATCCTCAACGATGCCCAGCGGCCGGTGACCATCCTCGAAATCACCGCGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1781728‑1781578 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggTGATTTCGAGGATGGTCACCGGCCGCTGGGCATCGTTGAGGATGGTCACTTGCGGCGGGAAGTCGAAGTGCTTGAGCTGCCGCGGTACCCGGCGCTGGATGATGGTCGG  >  NC_002947/1781619‑1781727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.