| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1805570 = | 54 (0.900) | 4 (0.070) | 4/256 | NT | 7.3% | coding (804/1284 nt) | tilS | tRNA lysidine(34) synthetase TilS |
| ? | NC_002947 | 1805622 = | 50 (0.860) | coding (856/1284 nt) | tilS | tRNA lysidine(34) synthetase TilS | |||||
GCTGTAGCCAATCACCGCTCAACCACCAGATGCGCCCGTGGCTACGCACCAACCGTCCATCGGCAAGCCGCCAGACTGGCCGGGCATCGGCACCGGCATCGCGCAGGTCTGCCCAGCCGGCCCAGTGCCGGGTATCGGGCAAACGGGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1805721‑1805570‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcGATGCCGGTGCCGATGCCCGGCCAGTCTGGCGGCTTGCCGATGGACGGTTGGTGCGTAGCCACGGGCGCATCTGGTGGTTGAGCGGTGATTGGCTACAGCAACCGGCTGGCTCGCTGGCCTGGCCCGACCCTGATGGGCCGTTGCG > NC_002947/1805622‑1805767 GCTGTAGCCAATCACCGCTCAACCACCAGATGCGCCCGTGGCTACGCACCAACCGTCCATCGGCAAGCCGCCAGACTGGCCGGGCATCGGCACCGGCATCGCGCAGGTCTGCCCAGCCGGCCCAGTGCCGGGTATCGGGCAAACGGGT < 3:27851/148‑1GCTGTAGCCAATCACCGCTCAACCACCAGATGCGCCCGTGGCTACACACCAACCGTCCAACGGCAAGCCGCCAGACTGGCCGGGCATCGGCACCGGCATCGCGCAGGTCTGCCCAGCCGGCCCAGTGCCGGGTATCGGGCAAACGGGT < 8:54226/148‑1 GTAGCCAATCACCGCTCAACCACCAGATGCGCCCGTGGCTACGCACCAACCGTCCATCGGCAAGCCGCCAGACTGGCCGGGCATCGGCACCGGCATCGCGCAGGTCTGCCCAGCCGGCCCAGTGCCGGGTATCGGGCAAACGGGTGCGC > 3:190748/1‑149 CATCGCGCAGGTCTGCCCAGCCGGCCCAGTGCCGGGTATCGGGCAAACGGGTGCGCGATGCCGGTGCCGATGCCCGGCCAGTCTGGCGGCTTGCCGATGGACGGTTGGTGCGTAGCCACGGGCGCATCTGGTGGTTGAGCGGTGATTGG > 6:203019/1‑149 ATCGCGCAGGTCTGCCCAGCCGGCCCAGTGCCGGGTATCGGGCAAACGGGTGCGCGATGCCGGTGCCGATGCCCGGCCAGTCTGGCGGCTTGCCGATGGACGGTTGGTGCGTAGCCACGGGCGCATCTGGTGGTTGAGCGGTGATTGGC > 8:81765/1‑149 CGCAGGTCTGCCCAGCCGGCCCAGTGCCGGGTATCGGGCAAACGGGTGCGCGATGCCGGTGCCGATGCCCGGCCAGTCTGGCGGCTTGCCGATGGACGGTTGGTGCGTAGCCACGGGCGCATCTGGTGGTTGAGCGGTGATTGGCTA > 5:95044/1‑147 GCCCAGCCGGCCCAGTGCCGGGTATCGGGCAGAC‑‑CTGCGCGATGCCGGTGCCGATGCCCGGCCAGTCTGGCGGCTTGCCGATGGACGGTTGGTGCGTAGCCACGGGCGCATCTGGTGGTTGAGCGGTGATTGGCTACAGCAACCGGCTG > 2:36285/1‑149 CGCGATGCCGGTGCCGATGCCCGGCCAGTCTGGCGGCTTGCCGATGGACGGTTGGTGCGTAGCCACGGGCGCATCTGGTGGTTGAGCGGTGATTGGCTACAGCAACCGGCTGGCTCGCTGGCCTGGCCCGACCCTGATGGGCCGTTGCG < 6:95044/149‑1 GCTGTAGCCAATCACCGCTCAACCACCAGATGCGCCCGTGGCTACGCACCAACCGTCCATCGGCAAGCCGCCAGACTGGCCGGGCATCGGCACCGGCATCGCGCAGGTCTGCCCAGCCGGCCCAGTGCCGGGTATCGGGCAAACGGGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1805721‑1805570‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcGATGCCGGTGCCGATGCCCGGCCAGTCTGGCGGCTTGCCGATGGACGGTTGGTGCGTAGCCACGGGCGCATCTGGTGGTTGAGCGGTGATTGGCTACAGCAACCGGCTGGCTCGCTGGCCTGGCCCGACCCTGATGGGCCGTTGCG > NC_002947/1805622‑1805767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |