New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2371842 = | 57 (0.950) | 4 (0.070) | 4/260 | NT | 7.0% | coding (4660/4866 nt) | gdhB | NAD‑specific glutamate dehydrogenase |
? | NC_002947 | 2371872 = | 51 (0.870) | coding (4690/4866 nt) | gdhB | NAD‑specific glutamate dehydrogenase |
GGGCATCCATGTCTTGCGGTGCATCGGCCATCTGCAGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2371881‑2371842 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacATGGATGCCCGCGTGGCGCTGTGGTCAGAGCAGCATCGGGGAATGGTGGAGCGCTGGCGCGCCATGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCAT > NC_002947/2371872‑2372017 GGGCATCCATGTCTTGCGGTGCATCGGCCATCTGCAGGACATGGATGCCCGCGTGGCGCTGTGGTCAGAGCAGCATCGGGGAATGGTGGAGCGCTGGCGCGCCATGCTCGACGACCTGCGCAAT < 5:197260/124‑1 GGGCATCCATGTCTTGCGGTGCATCGGCCATCTGCAGGACATGGATGCCCGCGTGGCGCTGTGGTCAGAGCAGCATCGGGGAATGGTGGAGCGCTGGCGCGCCATGCTCGACGACCTGCGCAAT > 6:197260/1‑124 GCATCCATGTCTTGCGGTGCATCGGCCATCTGCAGGACATGGATGCCCGCGTGGCGCTGTGGTCAGAGCAGCATCGGGGAATGGTGGAGCGCTGGCGCGCCATGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTAC > 8:44336/1‑149 TCGGCCATCTGCAGGACATGGATGCCCGCGTGGCGCTGTGGTCAGAGCAGCATCGGGGAATGGTGGAGCGCTGGCGCGCCATGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTG < 7:44336/149‑1 ACATGGATGCCCGCGTGGCGCTGTGGTCAGAGCAGCATCGGGGAATGGTGGAGCGCTGGCGCGCCATGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCAT > 4:292001/1‑148 GGGCATCCATGTCTTGCGGTGCATCGGCCATCTGCAGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2371881‑2371842 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacATGGATGCCCGCGTGGCGCTGTGGTCAGAGCAGCATCGGGGAATGGTGGAGCGCTGGCGCGCCATGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCAT > NC_002947/2371872‑2372017 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |