| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2665133 | 55 (0.910) | 3 (0.050) | 3/258 | NT | 5.2% | coding (996/2589 nt) | acnA‑II | aconitate hydratase |
| ? | NC_002947 | = 2665163 | 55 (0.940) | coding (1026/2589 nt) | acnA‑II | aconitate hydratase | |||||
CCTGACCTTGGGCGACCGCGCCACCATTTCCAACATGGCCCCGGAATACGGCGCCACGGCGGCGATGTTCGCCATCGACCAGCAGACCATCGACTACCTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2664983‑2665133‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccCAGGCTGTCAGCCCACAGGCCGGTGGCCTTGGCGTAGGTTTCCACAAGCTTGACCTGCTGCTCTTCACGGCCGGTCAGGCGCAGGTAGTCGATGGTCTGCTGGTCGATGGCGAACATCGCCGCCGTGGCGCCGTATTCCGGGGCCA < NC_002947/2665163‑2665018 CCTGACCTTGGGCGACCGCGCCACCATTTCCAACATGGCCCCGGAATACGGCGCCACGGCGGCGATGTTCGCCATCGACCAGCAGACCATCGACTACCTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACG < 2:266407/149‑1CCTGACCTTGGGCGACCGCGCCACCATTTCCAACATGGCCCCGGAATACGGCGCCACGGCGGCGATGTTCGCCATCGACCAGCAGACCATCGACTACCTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACG > 7:45973/1‑149 CTGACCTTGGGCGACCGCGCCACCATTTCCAACATGGCCCCGGAATACGGCGCCACGGCGGCGATGTTCGCCATCGACCAGCAGACCATCGACTACCTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGC < 6:4514/149‑1 CCCCGGAATACGGCGCCACGGCGGCGATGTTCGCCATCGACCAGCAGACCATCGACTACCTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCCAGGCTGTCAGCCCACAGGCCGGTGGCCTTGGCGTA < 2:294073/149‑1 CCGGAATACGGCGCCACGGCGGCGATGTTCGCCATCGACCAGCAGACCATCGACTACCTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCCAGGCTGTCAGCCCACAGGCCGGTGGCCTTGGCGTAG > 5:374658/1‑148 CCGGAATACGGCGCCACGGCGGCGATGTTCGCCATCGACCAGCAGACCATCGACTACCTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCCAGGCTGTCAGCCCACAGGCCGGTGGCCTTGGCGTAG < 6:374658/148‑1 GCCCAGGCTGTCAGCCCACAGGCCGGTGGCCTTGGCGTAGGTTTCCACAAGCTTGACCTGCTGCTCTTCACGGCCGGTCAGGCGCAGGTAGTCGATGGTCTGCTGGTCGATGGCGAACATCGCCGCCGTGGCGCCGTATTCCGGGGCCA < 3:236874/149‑1 CCTGACCTTGGGCGACCGCGCCACCATTTCCAACATGGCCCCGGAATACGGCGCCACGGCGGCGATGTTCGCCATCGACCAGCAGACCATCGACTACCTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2664983‑2665133‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccCAGGCTGTCAGCCCACAGGCCGGTGGCCTTGGCGTAGGTTTCCACAAGCTTGACCTGCTGCTCTTCACGGCCGGTCAGGCGCAGGTAGTCGATGGTCTGCTGGTCGATGGCGAACATCGCCGCCGTGGCGCCGTATTCCGGGGCCA < NC_002947/2665163‑2665018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |