| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2730421 | 51 (0.850) | 3 (0.050) | 3/248 | NT | 5.8% | coding (868/1044 nt) | PP_2392 | MFS transporter |
| ? | NC_002947 | = 2730442 | 50 (0.890) | coding (889/1044 nt) | PP_2392 | MFS transporter | |||||
CGGTTTTGCCTTGGCCACGCTGGCATTGGGGCAGGCATCGTCGTGGCTTGTGTACCTGAGCATCGCCTTGTGGGGAATGACCTATGGCGGCGCCCCGACCCTGCTGCAGACAGCGTGCGCCGACGCCGCAGGCCAGGGTGGTGATGTGGCGCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2730267‑2730421‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcagtTCCACACCGTCACCAGCATCGACTGCGCCACATCACCACCCTGGCCTGCGGCGTCGGCGCACGCTGTCTGCAGCAGGGTCGGGGCGCCGCCATAGGTCATTCCCCACAAGGCGATGCTCAGGTACACAAGCCACGACGATGCCTGC < NC_002947/2730442‑2730297 CGGTTTTGCCTTGGCCACGCTGGCATTGGGGCAGGCATCGTCGTGGCTTGTGTACCTGAGCATCGCCTTGTGGGGAATGACCTATGGCGGCGCCCCGACCCTGCTGCAGACAGCGTGCGCCGACGCCGCAGGCCAGGGTGGTGATGTGG > 1:77981/1‑149 TTGCCTTGGCCACGCTGGCATTGGGGCAGGCATCGTCGTGGCTTGTGTACCTGAGCATCGCCTTGTGGGGAATGACCTATGGCGGCGCCCCGACCCTGCTGCAGACAGCGTGCGCCGACGCCGCAGGCCAGGGTGGTGATGTGGCGCA < 4:151042/148‑1 TTGGACACGCTGGCATTGGGGCAGGAATCGTCGTGGCGTGTGTACCTGAGCATCGCCTTGTGGGGAATGACCTATGTCGGCGCCCCGACCCTGCTGCAGACAGCGTGCGCCGACGCCGCAGGCCAGGGTGTTGATGTGGAGAAGTagat > 6:285331/1‑145 ATCGTCGTGGCTTGTGTACCTGAGCATCGCCTTGTGGGGAATGACCTATGGCGGCGCCCCGACCCTGCTGCAGACAGCGTGCGCCGACGCCGCAGGCCAGGGTGGTGATGTGGCGCAGTTCCACACCGTCACCAGCATCGACTGCGCCA < 4:15276/149‑1 ATCGCCTTGTGGGGAATGACCTATGGCGGCGCCCCGACCCTGCTGCAGACAGCGTGCGCCGACGCCGCAGGCCAGGGTGGTGATGTGGCGCAGTTCCACACCGTCACCAGCATCGACTGCGC < 5:229423/122‑1 ATCGCCTTGTGGGGAATGACCTATGGCGGCGCCCCGACCCTGCTGCAGACAGCGTGCGCCGACGCCGCAGGCCAGGGTGGTGATGTGGCGCAGTTCCACACCGTCACCAGCATCGACTGCGC > 6:229423/1‑122 caacGGCGCAGGTCCACACCGTCACCAGCATCGACTGCGCCACATCACCACCCTGGCCTGCGGCGTCGGCGCACGCTGTCTGCAGCAGGGTCGGGGCGCCGCCATAGGTCATTCCCCACAAGGCGATGCTCAGGTACACAAGCCACGAC < 8:237039/145‑1 GCGCAGTTCCACACCGTCACCAGCATCGACCGCGCCACATCACCACCCTGGCCTGCGGCGTCGGCGCACGCTGTCTGCAGCAGGGTCGGGGCGCCGCCATAGGTCATTCCCCACAAGGCGATGCTCAG > 1:246399/1‑128 GCGCAGTTCCACACCGTCACCAGCATCGACCGCGCCACATCACCACCCTGGCCTGCGGCGTCGGCGCACGCTGTCTGCAGCAGGGTCGGGGCGCCGCCATAGGTCATTCCCCACAAGGCGATGCTCAG < 2:246399/128‑1 GCAGTTCCACACCGTCACCAGCATCGACTGCGCCACATCACCACCCTGGCCTGCGGCGTCGGCGCACGCTGTCTGCAGCAGGGTCGGGGCGCCGCCATAGGTCATTCCCCACAAGGCGATGCTCAGGTACACAA < 7:253100/134‑1 GCAGTTCCACACCGTCACCAGCATCGACTGCGCCACATCACCACCCTGGCCTGCGGCGTCGGCGCACGCTGTCTGCAGCAGGGTCGGGGCGCCGCCATAGGTCATTCCCCACAAGGCGATGCTCAGGTACACAA > 8:253100/1‑134 AGTTCCACACCGTCACCAGCATCGACTGCGCCACATCACCACCCTGGCCTGCGGCGTCGGCGCACGCTGTCTGCAGCAGGGTCGGGGCGCCGCCATAGGTCATTCCCCACAAGGCGATGCTCAGGTACACAAGCCACGACGATGCCTGC > 8:46210/1‑149 CGGTTTTGCCTTGGCCACGCTGGCATTGGGGCAGGCATCGTCGTGGCTTGTGTACCTGAGCATCGCCTTGTGGGGAATGACCTATGGCGGCGCCCCGACCCTGCTGCAGACAGCGTGCGCCGACGCCGCAGGCCAGGGTGGTGATGTGGCGCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2730267‑2730421‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcagtTCCACACCGTCACCAGCATCGACTGCGCCACATCACCACCCTGGCCTGCGGCGTCGGCGCACGCTGTCTGCAGCAGGGTCGGGGCGCCGCCATAGGTCATTCCCCACAAGGCGATGCTCAGGTACACAAGCCACGACGATGCCTGC < NC_002947/2730442‑2730297 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |