| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2915382 = | 58 (0.960) | 3 (0.050) | 3/252 | NT | 5.4% | coding (4402/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
| ? | NC_002947 | 2915438 = | 50 (0.880) | coding (4458/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin | |||||
TGCCCGGCGGCATCGGCCTCGGCAATCTTGATTTGCGCGAGGATGAAGTTCAGGTCGGAGCGCACCATGTGCAGGCCGGCACCGCCGTCACTGGCATCCACCACCGGGGTGGCCACTGTCGGCACCACGGGCGCGCCCGGTTGCACCACGGTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2915536‑2915382‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtggtGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTG > NC_002947/2915438‑2915582 TGCCCGGCGGCATCGGCCTCGGCAATCTTGATTTGCGCGAGGATGAAGTTCAGGTCGGAGCGCACCATGTGCAGGCCGGCACCGCCGTCACTGGCATCCACCACCGGGGTGGCCACTGTCGGCACCACGGGCGCGCCCCGTTGCACCAC > 4:130782/1‑149TGCCCGGCGGAATCGGCCTCGGCAATCTTGATTTGCGCGAGGATGAAGTTCAGGTCGGAGCGCACCATGTGCAGGCCGGCACCGCCGTCACTGGCATCCACCACCGGGGTGGCCACTGTCGGCACCACGGGCGCGCCCGGTTGCACCAC > 4:125413/1‑149 CCGGCGGCATCGGCCTCGGCAATCTTGATTTGCGCGAGGATGAAGTTCAGGTCGGAGCGCACCATGTGCAGGCCGGCACCGCCGTCACTGGCATCCACCACCGGGGTGGCCACTGTCGGCACCACGGGCGCGCCCGGTTGCACCACGGT > 6:7401/1‑149 CGGCGGCATCGGCCTCGGCAATCTTGATTTGCGCGAGGATGAAGTTCAGGTCGGAGCGCACCATGTGCAGGCCGGCACCGCCGTCACTGGCATCCACCACCGGGGTGGCCACTGTCGGCTCCACGGGCGCGCCCGGTTGCACCACGGTG > 2:214966/1‑149 CGGCGGCATCGGCCTCGGCAATCTTGATTTGCGCGAGGATGAAGTTCAGGTCGGAGCGCACCATGTGCAGGCCGGCACCGCCGTCACTGGCATCCACCACCGGGGTGGCCACTGTCGGCACCACGGGCGCGCCCGGTTGCACCACGGTG < 3:362898/149‑1 CGGCGGCATCGGCCTCGGCAATCTTGATTTGCGCGAGGATGAAGTTCAGGTCGGAGCGCACCATGTGCAGGCCGGCACCGCCGTCACTGGCATCCACCACCGGGGTGGCCACTGTCGGCACCACGGGCGCGCCCGGTTGCACCACGGTG < 4:114012/149‑1 CCACCACCGGGGTGGCCACTGTCGGCACCACGGGCGCGCCCGGTTGCACCACGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCC > 8:177134/1‑149 CCGGGGTGGCCACTGTCGGCACCACGGGCGCGCCCGGTTGCACCACGGTGGTGGATGCCAGTGACGCCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGG > 5:87407/1‑149 GTGGCCACTGTCGGCACCACGGGCGCGCCCGGTTGCACCACGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGA < 7:177134/149‑1 TGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTG > 1:338735/1‑149 TGCCCGGCGGCATCGGCCTCGGCAATCTTGATTTGCGCGAGGATGAAGTTCAGGTCGGAGCGCACCATGTGCAGGCCGGCACCGCCGTCACTGGCATCCACCACCGGGGTGGCCACTGTCGGCACCACGGGCGCGCCCGGTTGCACCACGGTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2915536‑2915382‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtggtGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTG > NC_002947/2915438‑2915582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |