New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3101002 =	63 (1.050)	5 (0.080)	4/262	NT	7.8%	coding (303/681 nt)	PP_2710	hypothetical protein
	?	NC_002947	3101034 =	56 (0.950)					coding (335/681 nt)	PP_2710	hypothetical protein

GACCATCAGCTCGATGGATTGCACCGGCTGGCCATCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3101041‑3101002 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcTGATGGTCGCCTACCTGTACGACCTGATCGCCCGTGGCAACCCGGTCGGGTTGTTCGGCATGGTCAACGTGCTCGAAGGCACCAGCATCGCCCTGGCCACCCAGGCGGCGGGCGTTATCCAGAACACATTGGCCCTGCCTGACCAGGC  >  NC_002947/3101034‑3101181                                                                                                                                                                                              GACCATCAGCTCGATGGATTGCACCGGCTGGCCATCGCGCTGATGGTCGCCTACCTGTACGACCTGATCGCCCGTGGCAACCCGGTCGGGTTGTTCGGCATGGTCAACGTGCTCGAAGGCACCAGCATCGCCCTGGCCACCCAGGCGGC                                         >  2:325018/1‑149 GACCATCAGCTCGATGGATTGCACCGGCTGGCCATCGCGCTGATGGTCGCCTACCTGTACGACCTGATCGCCCGTGGCAACCCGGTCGGGTTGTTCGGCATGGTCAACGTGCTCGAAGGCACCAGCATCGCCCTGGCCACCCAGGCGGC                                         >  2:330386/1‑149        AGCTCGATGGATTGCACCGGCTGGCCATCGCGCTGATGGTCGCCTACCTGTACGACCTGATCGCCCGTGGCAACCCGGTCGGGTTGTTCGGCATGGTCAACGTGCTCGAAG                                                                        <  1:224864/111‑1        AGCTCGATGGATTGCACCGGCTGGCCATCGCGCTGATGGTCGCCTACCTGTACGACCTGATCGCCCGTGGCAACCCGGTCGGGTTGTTCGGCATGGTCAACGTGCTCGAAG                                                                        >  2:224864/1‑111           TCGATGGATTGCACCGGCTGGCCATCGAGCTGATGGTCGCCTACCTGTACGACCTGATCGCCCGTGGCAACCCGGTCGGGTTGTTCGGCATGGTCAACGTGCTCGAAGGCACCAGCATCGCCCTGGCCCCCCAGGCGGCGGGCGTTATC                               >  6:261373/1‑149                                        CTGATGGTCGCCTACCTGTACGACCTGATCGCCCGTGGCAACCCGGTCGGGTTGTTCGGCATGGTCAACGTGCTCGAAGGCACCAGCATCGCCCTGGCCACCCAGGCGGCGGGCGTTATCCAGAACACATTGGCCCTGCCTGACCAGGC  <  5:217199/149‑1                                                                                                                                                                                              GACCATCAGCTCGATGGATTGCACCGGCTGGCCATCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3101041‑3101002 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcTGATGGTCGCCTACCTGTACGACCTGATCGCCCGTGGCAACCCGGTCGGGTTGTTCGGCATGGTCAACGTGCTCGAAGGCACCAGCATCGCCCTGGCCACCCAGGCGGCGGGCGTTATCCAGAACACATTGGCCCTGCCTGACCAGGC  >  NC_002947/3101034‑3101181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.