| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3164839 = | 54 (0.900) | 5 (0.090) | 4/258 | NT | 9.2% | coding (350/1083 nt) | PP_2779 | putative Beta‑ketoacyl synthase |
| ? | NC_002947 | 3164866 = | 46 (0.790) | coding (377/1083 nt) | PP_2779 | putative Beta‑ketoacyl synthase | |||||
GCATTGCCCTGGGAGCAAAAACCACCCATGGGCCCCTTGCAACGCAAGGCCTCAGCCGCGTGGGCCATGACGCTGCTGTTGAGCATCATCAGCGCATGCAGCGGCGGTGTGTGGGCAAAGAATTGCGCCAACAGATCTGCCGGTTGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3164989‑3164839‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcAATTCTTTGCCCACACACCGCCGCTGCATGCGCTGATGATGCTCAACAGCAGCGTCATGGCCCACGCGGCTGAGGCCTTGCGTTGCAAGGGGCCCATGGGTGGTTTTTGCTCCCAGGGCAATGCGGGGCTGGATGCTTTGATGGAG > NC_002947/3164866‑3165011 GCATTGCCCTGGGAGCAAAAACCACCCATGGGCCCCTTGCAACGCAAGGCCTCAGCCGCGTGGGCCATGACGCTGCTGTTGAGCATCATCAGCGCATGCAGCGGCGGTGTGTGGGCAAAGAATTGCGCCAACAGATCTGCCGGTTGTGC < 1:349206/149‑1 CATTGCCCTGGGAGCAAAAACCACCCATGGGCCCCTTGCAACGCAAGGCCTCAGCCGCGTGGGCCATGACGCTGCTGTTGAGCATCATCAGCGCATGCAGCGGCGGTGTGTGGGCAAAGAATTGCGCCAACAGATCTGCCGGTTGTGCG < 6:342549/149‑1 GCAAAGAATTGCGCCAACAGATCTGCCGGTTGTGCGCAATTCTTTGCCCACACACCGCCGCTGCATGCGCTGATGATGCTCAACAGCAGCGTCATGGCCCACGCGGCTGAGGCCTTGCGTTGCAAGGG < 3:159483/128‑1 GCAAAGAATTGCGCCAACAGATCTGCCGGTTGTGCGCAATTCTTTGCCCACACACCGCCGCTGCATGCGCTGATGATGCTCAACAGCAGCGTCATGGCCCACGCGGCTGAGGCCTTGCGTTGCAAGGG > 4:159483/1‑128 CAAAGAATTGCGCCAACAGATCTGCCGGTTGTGCGCAATTCTTTGCCCACACACCGCCGCTGCATGCGCTGATGATGCTCAACAGCAGCGTCATGGCCCACGCGGCTGAGGCCTTGCGTTGCAAGGGGCCCATGGGTGGTTTTTGCTCC > 1:5207/1‑149 AAAGAATTGCGCCAACAGATCTGCCGGTTGTGCGCAATTCTTTGCCCACACACCGCCGCTGCATGCGCTGATGATGCTCAACAGCAGCGTCATGGCCCACGCGGCTGAGGCCTTGCGTTGCAAGGGGCCCATGGGTGGTTTTTGCTCC > 1:297334/1‑148 AAAGAATTGCGCCAACAGATCTGCCGGTTGTGCGCAATTCTTTGCCCACACACCGCCGCTGCATGCGCTGATGATGCTCAACAGCAGCGTCATGGCCCACGCGGCTGAGGCCTTGCGTTGCAAGGGGCCCATGGGTGGTTTTTGCTCC > 4:193953/1‑148 CGCAATTCTTTGCCCACACACCGCCGCTGCATGCGCTGATGATGCTCAACAGCAGCGTCATGGCCCACGCGGCTGAGGCCTTGCGTTGCAAGGGGCCCATGGGTGGTTTTTGCTCCCAGGGCAATGCGGGGCTGGATGCTTTGATGGAG > 6:247597/1‑149 GCATTGCCCTGGGAGCAAAAACCACCCATGGGCCCCTTGCAACGCAAGGCCTCAGCCGCGTGGGCCATGACGCTGCTGTTGAGCATCATCAGCGCATGCAGCGGCGGTGTGTGGGCAAAGAATTGCGCCAACAGATCTGCCGGTTGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3164989‑3164839‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcAATTCTTTGCCCACACACCGCCGCTGCATGCGCTGATGATGCTCAACAGCAGCGTCATGGCCCACGCGGCTGAGGCCTTGCGTTGCAAGGGGCCCATGGGTGGTTTTTGCTCCCAGGGCAATGCGGGGCTGGATGCTTTGATGGAG > NC_002947/3164866‑3165011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |