New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3458060 =	61 (1.010)	4 (0.070)	4/260	NT	6.4%	coding (631/1392 nt)	bhbP	D‑beta‑hydroxybutyrate permease
	?	NC_002947	3458119 =	58 (0.990)					coding (572/1392 nt)	bhbP	D‑beta‑hydroxybutyrate permease

CACAGATCCAGAACATCATCCCCAGCACCTTCTTCAACACCACCGCCTGGGCCGCACCGTGGCTGGGCCTGATCGGCACGCTGTTCGTGTTCTTTACCGGCATGGCCTACCTGCAGCGCCAGCGCAACAAGGCCCAGCGCGCCGGTGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3458209‑3458060 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagAACACGAACAGCGTGCCGATCAGGCCCAGCCACGGTGCGGCCCAGGCGGTGGTGTTGAAGAAGGTGCTGGGGATGATGTTCTGGATCTGTGGGGTGCCGGGCAGGGCGTCCATGGTGAACGAGAATGCGCCCAGGGCGATGGTGGC  >  NC_002947/3458119‑3458264                                                                                                                                                                                                                                                                                                          CACAGATCCAGAACATCATCCCCAGCACCTTCTTCAACACCACCGCCTGGGCCGCACCGTGGCTGGGCCTGATCGGCACGCTGTTCGTGTTCTTTACCGGCATGGCCTACCTGCAGCGCCAGCGCAACAAGGCCCAGCGCGCCGGTGAA                                                                                                                                                     <  7:338854/149‑1                                                                             CACGCTGTTCGTGTTCTTTACCGGCATGGCCTACCTGCAGCGCCAGCGCAACAAGGCCCAGCGCGCCGGTGAAGAACACGAACAGCGTGCCGATCAGGCCCAGCCACGGTGCGGCCCAGGCGGTGGTGTTGAAGAAGGTGCTGGGGAT                                                                          >  6:125750/1‑148                                                                                       GTGTTCTTTACCGGCATGGCCTACCTGCAGCGCCAGCGCAACAAGGCCCAGCGCGCCGGTGAAGAACACGAACAGCGTGCCGATCAGGCCCAGCCACGGTGCGGCCCAGGCGGTGGTGTTGAAGAAG                                                                                     <  3:371834/127‑1                                                                                       GTGTTCTTTACCGGCATGGCCTACCTGCAGCGCCAGCGCAACAAGGCCCAGCGCGCCGGTGAAGAACACGAACAGCGTGCCGATCAGGCCCAGCCACGGTGCGGCCCAGGCGGTGGTGTTGAAGAAG                                                                                     >  4:371834/1‑127                                                                                                                                  AGGCCCAGCGCGCCGGTGAAGAACACGAACAGCGTGCCGATCAGGCCCAGCCACGGTGCGGCCCAGGCGGTGGTGTTGAAGAAGGTGCTGGGGATGATGTTCTGGATCTGTGGGGTGCCGGGCAGGGCGTCCATGGTGAACGAGAATGC                    <  5:125750/149‑1                                                                                                                                                    AAGAACACGAACAGCGTGCCGATCAGGCCCAGCCACGGTGCGGCCCAGGCGGTGGTGTTGAAGAAGGTGCTGGGGATGATGTTCTGGATCTGTGGGGTGCCGGGCAGGGCGTCCATGGTGAACGAGAATGCGCCCAGGGCGATGGTGGC  <  5:113121/149‑1                                                                                                                                                                                                                                                                                                          CACAGATCCAGAACATCATCCCCAGCACCTTCTTCAACACCACCGCCTGGGCCGCACCGTGGCTGGGCCTGATCGGCACGCTGTTCGTGTTCTTTACCGGCATGGCCTACCTGCAGCGCCAGCGCAACAAGGCCCAGCGCGCCGGTGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3458209‑3458060 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagAACACGAACAGCGTGCCGATCAGGCCCAGCCACGGTGCGGCCCAGGCGGTGGTGTTGAAGAAGGTGCTGGGGATGATGTTCTGGATCTGTGGGGTGCCGGGCAGGGCGTCCATGGTGAACGAGAATGCGCCCAGGGCGATGGTGGC  >  NC_002947/3458119‑3458264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.