| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3590330 | 75 (1.250) | 5 (0.090) | 5/248 | NT | 6.3% | coding (851/1251 nt) | nicP‑I | porin‑like protein |
| ? | NC_002947 | = 3590342 | 78 (1.390) | coding (863/1251 nt) | nicP‑I | porin‑like protein | |||||
ACCAACAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3590174‑3590330‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcatggAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCTGTGCTTCA < NC_002947/3590342‑3590195 gCCAACAAAGCCTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCC > 5:327500/2‑149gCCAACAAAGCCTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCC > 7:221712/2‑149 CCAACAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCC < 6:276088/149‑1 CAACAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCG > 1:359180/1‑149 AACAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGG > 2:192438/1‑149 ACAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGG > 7:115967/1‑148 CAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCA < 4:116584/149‑1 AAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCAT > 3:192213/1‑149 ACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATGGAAGCTGTGCCCGCCATGCC > 5:141921/1‑149 CAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATGGAAGCTGTGCCCGCCATGCCG < 6:141921/149‑1 GTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGCCAACCAGGCGTTCTTCTCGCTGTGCACTGCCCGGCATGGAAGCTGGGCCCGCCATGCCGGGCAGTGAAC < 5:76055/149‑1 GAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATGGAAGCTGTGCCCGCCATGCCGGGCA < 3:34938/95‑1 GAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATGGAAGCTGTGCCCGCCATGCCGGGCA > 4:34938/1‑95 GGCATGGAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCTGT > 7:62049/1‑149 GCATGGAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGGGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCATTCGCCGACGGGTTTGCTGTG < 2:1623/149‑1 GCATGGAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCTGTG < 2:61662/149‑1 CATGGAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCTGTGC < 5:116818/149‑1 GGAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTG > 4:270198/1‑62 GGAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTG < 3:270198/62‑1 GAAGCTGTCCCCGCCATGCCGGGCAGGGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCTGTGCTTCA < 8:322478/149‑1 ACCAACAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3590174‑3590330‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcatggAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCTGTGCTTCA < NC_002947/3590342‑3590195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |