| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3632226 | 52 (0.860) | 3 (0.050) | 3/256 | NT | 5.5% | coding (1120/1368 nt) | PP_5590 | hypothetical protein |
| ? | NC_002947 | = 3632274 | 53 (0.920) | coding (1168/1368 nt) | PP_5590 | hypothetical protein | |||||
CAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3632075‑3632226‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacctTGGCCAACTGGTTGCGGGCGTCATAGCGCTCGCCCAGCACGGCAGCCCAGGTGTCTTCGTCGAGGTAGTAGGTGCTACGCGGCATCACATGGCGCTGGCCATTCTTCAGCGTCGCCTCCACCACCCACACACGGTGCAGCTCCCAGC < NC_002947/3632274‑3632128 CAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACA > 2:175531/1‑149CAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACA < 7:92003/149‑1 AGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACAC < 6:311836/149‑1 GCAGCGCCTCGGCGTTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCAGGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACACC > 8:212385/1‑149 CAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACACCT > 8:99510/1‑149 GCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACACCTTGGCCAACTGGTTGCGGGCGTCATAGCGCTCGCCCAGCACGGCAGCCCAGGTGTCT < 8:179848/148‑1 GTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACACCTTGGCCAACTGGTTGCGGGCGTCATAGCGCTCGCCCAGCACGGCAGCCCAGGTGTCTTC > 5:297987/1‑142 GTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACACCTTGGCCAACTGGTTGCGGGCGTCATAGCGCTCGCCCAGCACGGCAGCCCAGGTGTCTTC < 6:297987/142‑1 CCTTGGCCAACTGGTTGCGGGCGTCATAGCGCTCGCCCAGCACGGCAGCCCAGGTGTCTTCGTCGAGGTAGTAGGTGCTACGCGGCATCACATGG < 7:134195/95‑1 CCTTGGCCAACTGGTTGCGGGCGTCATAGCGCTCGCCCAGCACGGCAGCCCAGGTGTCTTCGTCGAGGTAGTAGGTGCTACGCGGCATCACATGG > 8:134195/1‑95 CTTGGCCAACTGGTTGCGGGCGTCATAGCGCTCGCCCAGCACGGCAGCCCAGGTGTCTTCGTCGAGGTAGTAGGTGCTACGCGGCATCACATGGCGCTGGCCATTCTTCAGCGTCGCCTCCACCACCCACACACGGTGCAGCTCCCAGC > 5:144394/1‑149 CTTGGCCAACTGGTTGCGGGCGTCATAGCGCTCGCCCAGCACGGCAGCCCAGGTGTCTTCGTCGAGGTAGTAGGTGCTACGCGGCATCACATGGCGCTGGCCATTCTTCAGCGTCGCCTCCACCACCCACACACGGTGCAGCTCCCAGC > 8:38199/1‑149 CAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3632075‑3632226‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacctTGGCCAACTGGTTGCGGGCGTCATAGCGCTCGCCCAGCACGGCAGCCCAGGTGTCTTCGTCGAGGTAGTAGGTGCTACGCGGCATCACATGGCGCTGGCCATTCTTCAGCGTCGCCTCCACCACCCACACACGGTGCAGCTCCCAGC < NC_002947/3632274‑3632128 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |