| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3662134 | 54 (0.900) | 6 (0.110) | 6/252 | NT | 10.2% | coding (700/1143 nt) | PP_3226 | acyl‑CoA dehydrogenase‑related protein |
| ? | NC_002947 | = 3662170 | 55 (0.970) | coding (664/1143 nt) | PP_3226 | acyl‑CoA dehydrogenase‑related protein | |||||
GCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3661984‑3662134‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgtcAGCGTCAGCCCCGCCAGTGCCCCGCAGGCCGAACTAGACGGCGAGAGCCTACTGTGGATGGCGGTGTTACTGCCGGCCGTATACGACGGCGTGGCCCGCGCCGCGCGCGACTGGCTGGCGGGCTTTCTCAAGCAGCGCACACCTTCC < NC_002947/3662170‑3662024 GCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCG > 6:215900/1‑149 aGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACAACCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTC > 1:124768/2‑149 TGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTC < 3:21496/149‑1 GAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTC < 1:367931/147‑1 GGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCAGCGTCAGCCCCGCCAG > 7:159589/1‑149 CAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCAGCGTCAGCCCCGCCAGTGC > 5:156573/1‑149 GTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCAGCGTCAGCCCCGCCAGTGCCCCGCAGGCCGAAC > 5:80266/1‑148 GGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCAGCGTCAGCCCCGCCAGTGCCCCGCAGGCCGAACTAG < 6:156573/148‑1 GGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCAGCGTCAGCCCCGCCAGTGCCCCGCAGGCCGAACTAGACGGC < 6:80266/149‑1 TGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCAGCGTCAGCCCCGCCAGTGCCCCGCAGGCCGAACTAGACGGCGA < 8:159589/149‑1 TCAGCGTCAGCCCCGCCAGTGCCCCGCAGGCCGAACTAGACGGCGAGAGCCTACTGTGGATGGCGGTGTTACTGCCGGCCGTATACGACGGCGTGGCCCGCGCCGCGCGCGACTGGCTGGCGGGCTTTCTCAAGCAGCGCACACCTTCC < 1:238688/149‑1 GCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3661984‑3662134‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgtcAGCGTCAGCCCCGCCAGTGCCCCGCAGGCCGAACTAGACGGCGAGAGCCTACTGTGGATGGCGGTGTTACTGCCGGCCGTATACGACGGCGTGGCCCGCGCCGCGCGCGACTGGCTGGCGGGCTTTCTCAAGCAGCGCACACCTTCC < NC_002947/3662170‑3662024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |