New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3790787 = | 53 (0.880) | 4 (0.070) | 4/258 | NT | 7.3% | coding (231/1026 nt) | PP_3353 | sulfatase‑modifying protein |
? | NC_002947 | 3790824 = | 50 (0.860) | coding (268/1026 nt) | PP_3353 | sulfatase‑modifying protein |
GCGTTGGTGACCGGATGCACGTCAATCCAGAAGCCGGACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3790828‑3790787 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccAACGCCCAGTTCGCGCGCTTCGTCAAGGCCACGGGGTATGTCACCCATGCCGAGCGCGGTACCCGTGTCGAGGACGACCCTGCCCTGCCCGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGC > NC_002947/3790824‑3790957 GCGTTGGTGACCGGATGCACGTCAATCCAGAAGCCGGACACCAACGCCCAGTTCGCGCGCTTCGTCAAGGCCACGGGGTATGTCACCCATGCCGAGCGCGGTACCCGTGTCGAGGACGACCCTGCCCTGCCCGACGCGCTGC < 2:298044/142‑1 GCGTTGGTGACCGGATGCACGTCAATCCAGAAGCCGGACACCAACGCCCAGTTCGCGCGCTTCGACAAGGCCACGGGGTATGTCACCCATGCCGAGCGCGGTACCCGTGTCGAGGACGACCCTGCCCTGCCCGACGCGCTGC > 1:298044/1‑142 CGTTGGTGACCGGATGCACGTCAATCCAGAAGCCGGACACCAACGCCCAGTTCGCGCGCTTCGTCAAGGCCACGGGGTATGTCACCCATGCCGAGCGCGGTACCCGTGTCGAGGACGACCCTGCCCTGCCCGACGCGCTGCGGATACCG > 3:143331/1‑149 TTGGTGACCGGATGCACGTCAATCCAGAAGCCGGACACCAACGCCCAGTTCGCGCGCTTCGTCAAGGCCACGGGGTATGTCACCCATGCCGAGCGCGGTACCCGTGTCGAGGACGACCCTGCCCTGCCCGACGCGCTGCGGATACCGGG > 6:94525/1‑149 ACCAACGCCCAGTTCGCGCGCTGCGTCAAGGCCACGGTGTATGTCACCCATGCCGAGCGCGGTACCCGTGTCGAGGACGACCCTGCCCTGCCCGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGC < 5:290983/137‑1 CAACGCCCAGTTCGCGCGCTTCGTCAAGGCCACGGGGTATGTCACCCATGCCGAGCGCGGTACCCGTGTCGAGGACGACC > 5:263617/1‑80 CAACGCCCAGTTCGCGCGCTTCGTCAAGGCCACGGGGTATGTCACCCATGCCGAGCGCGGTACCCGTGTCGAGGACGACC < 6:263617/80‑1 GCGTTGGTGACCGGATGCACGTCAATCCAGAAGCCGGACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3790828‑3790787 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccAACGCCCAGTTCGCGCGCTTCGTCAAGGCCACGGGGTATGTCACCCATGCCGAGCGCGGTACCCGTGTCGAGGACGACCCTGCCCTGCCCGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGC > NC_002947/3790824‑3790957 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |