New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3842471 = | 61 (1.010) | 4 (0.070) | 4/256 | NT | 6.9% | coding (414/1317 nt) | PP_3391 | tartrate MFS transporter |
? | NC_002947 | 3842508 = | 49 (0.850) | coding (377/1317 nt) | PP_3391 | tartrate MFS transporter |
AAACGCTACGGGGCTCCGGCCTGGATCTGCCGGATCATGGTGTCCTGGGGCCTGGCGACGGCTGCGCTGGTATTTGCCTATACCCAGTACACGCTGTACTTCCTACGCTTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3842620‑3842471 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatcAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGTCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCCGTAGCGTTTCAGGCCAAGACTGCTGGGCACTTCGAACAGCAC > NC_002947/3842508‑3842653 AAACGCTACGGGGCTCCGGCCTGGATCTGCCGGATCATGGTGTCCTGGGGCCTGGCGACGGCTGCGCTGGTATTTGCCTATACCCAGTACACGCTGTACTTCCTACGCTTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGAT < 3:370651/149‑1 AACGCTACGGGGCTCCGGCCTGGATCTGCCGGATCATGGTGTCCTGGGGCCTGGCGACGGCTGCGCTGGTATTTGCCTATACCCAGTACACGCTGTACTTCCTACGCTTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGATC < 3:169081/149‑1 CTTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGATCAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGTCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCC < 5:162398/147‑1 CTTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGATCAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGTCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCC > 6:162398/1‑147 TTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGATCAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGGCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCCG > 1:133462/1‑147 GCGTCATGGAGGCCGGTTTCGGCCCGGCGATCAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGCCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCCGTAGCGTTTCAGG < 2:133462/149‑1 GATCAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGTCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCCGTAGCGTTTCAGGCCAAGACTGCTGGGCACTTCGAACAGCA < 3:206327/149‑1 tTCAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGTCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCCGTAGCGTTTCAGGCCAAGACTGCTGGGCACTTCGAACAGCAC < 4:169081/148‑1 AAACGCTACGGGGCTCCGGCCTGGATCTGCCGGATCATGGTGTCCTGGGGCCTGGCGACGGCTGCGCTGGTATTTGCCTATACCCAGTACACGCTGTACTTCCTACGCTTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3842620‑3842471 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatcAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGTCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCCGTAGCGTTTCAGGCCAAGACTGCTGGGCACTTCGAACAGCAC > NC_002947/3842508‑3842653 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |