New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3842471 =61 (1.010)4 (0.070) 4/256 NT 6.9% coding (414/1317 nt) PP_3391 tartrate MFS transporter
?NC_002947 3842508 = 49 (0.850)coding (377/1317 nt) PP_3391 tartrate MFS transporter

AAACGCTACGGGGCTCCGGCCTGGATCTGCCGGATCATGGTGTCCTGGGGCCTGGCGACGGCTGCGCTGGTATTTGCCTATACCCAGTACACGCTGTACTTCCTACGCTTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3842620‑3842471
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatcAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGTCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCCGTAGCGTTTCAGGCCAAGACTGCTGGGCACTTCGAACAGCAC  >  NC_002947/3842508‑3842653
                                                                                                                                                                                                                                                                                                        
AAACGCTACGGGGCTCCGGCCTGGATCTGCCGGATCATGGTGTCCTGGGGCCTGGCGACGGCTGCGCTGGTATTTGCCTATACCCAGTACACGCTGTACTTCCTACGCTTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGAT                                                                                                                                                     <  3:370651/149‑1
 AACGCTACGGGGCTCCGGCCTGGATCTGCCGGATCATGGTGTCCTGGGGCCTGGCGACGGCTGCGCTGGTATTTGCCTATACCCAGTACACGCTGTACTTCCTACGCTTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGATC                                                                                                                                                    <  3:169081/149‑1
                                                                                                           CTTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGATCAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGTCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCC                                            <  5:162398/147‑1
                                                                                                           CTTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGATCAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGTCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCC                                            >  6:162398/1‑147
                                                                                                            TTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGATCAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGGCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCCG                                           >  1:133462/1‑147
                                                                                                                      GCGTCATGGAGGCCGGTTTCGGCCCGGCGATCAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGCCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCCGTAGCGTTTCAGG                               <  2:133462/149‑1
                                                                                                                                                  GATCAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGTCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCCGTAGCGTTTCAGGCCAAGACTGCTGGGCACTTCGAACAGCA   <  3:206327/149‑1
                                                                                                                                                   tTCAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGTCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCCGTAGCGTTTCAGGCCAAGACTGCTGGGCACTTCGAACAGCAC  <  4:169081/148‑1
                                                                                                                                                                                                                                                                                                        
AAACGCTACGGGGCTCCGGCCTGGATCTGCCGGATCATGGTGTCCTGGGGCCTGGCGACGGCTGCGCTGGTATTTGCCTATACCCAGTACACGCTGTACTTCCTACGCTTTCTGATCGGCGTCATGGAGGCCGGTTTCGGCCCGGCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3842620‑3842471
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatcAGAAAGCGTAGGAAGTACAGCGTGTACTGGGTATAGGCAAATACCAGCGCAGCCGTCGCCAGGCCCCAGGACACCATGATCCGGCAGATCCAGGCCGGAGCCCCGTAGCGTTTCAGGCCAAGACTGCTGGGCACTTCGAACAGCAC  >  NC_002947/3842508‑3842653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.