| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3916981 | 49 (0.810) | 4 (0.070) | 4/250 | NT | 7.9% | coding (763/3129 nt) | mexB | multidrug resistance protein MexB |
| ? | NC_002947 | = 3917012 | 47 (0.830) | coding (794/3129 nt) | mexB | multidrug resistance protein MexB | |||||
CCGAAGCCATCGCCGCGCAGAACGCCCAGGTCGCCCCTGGCAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3916826‑3916981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacccggGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTGCTCAACTGGCCTTTGACCACCACGTTGGCGGTGATTTCCTGGGTGCTGCGGCTGGGCAGATCGCCGATG < NC_002947/3917012‑3916869 CCGAAGCCATCGCCGCGCAGAACGCCCAGGTCGCCCCTGGCAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCC < 4:209495/149‑1 GAAGCCATCGCCGCGCAGAACGCCCAGGTCGCCCCTGGCAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAA < 3:11375/149‑1 GAAGCCATCGCCGCGCAGAACGCCCAGGTCGCCCCTGGCAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAA > 8:248930/1‑149 CCAGCGCCGCGCAGAACGCCCAGGTCGCCCCTGGCAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCCCCAACGGGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCG < 6:313660/149‑1 CGCCCCTGGCAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGGGCGACATCCCCGATGGTGACCGTG < 4:361059/149‑1 GCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGG > 6:369276/1‑149 TCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTT < 5:369276/149‑1 GGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTG < 2:299834/148‑1 CAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTGCTCAACTGGCCTTTGACCACCACGTTGGCGGTGATTTCCTGGGTGCTGCGGCTGGGCAGATCGCC < 8:187113/148‑1 AACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTGCTCAACTGGCCTTTGACCACCACGTTGGCGGTGATTTCCTGGGTGCTGCGGCTGGGCAGATCGCCGA < 6:209531/149‑1 CCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTGCTCAACTGGCCTTTGACCACCACGTTGGCGGTGATTTCCTGGGTGCTGCGGCTGGGCAGATCGCCGATG > 5:76755/1‑149 CCGAAGCCATCGCCGCGCAGAACGCCCAGGTCGCCCCTGGCAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3916826‑3916981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacccggGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTGCTCAACTGGCCTTTGACCACCACGTTGGCGGTGATTTCCTGGGTGCTGCGGCTGGGCAGATCGCCGATG < NC_002947/3917012‑3916869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |