| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4144914 = | 64 (1.060) | 4 (0.070) | 4/250 | NT | 6.6% | coding (467/753 nt) | PP_3649 | GntR family transcriptional regulator |
| ? | NC_002947 | 4144974 = | 53 (0.940) | coding (527/753 nt) | PP_3649 | GntR family transcriptional regulator | |||||
CCTGGTGGGCCACCAGCGGGTCGCCGCCCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4145069‑4144914‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccacctCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCACCAGGCCTCGGTCGACCACGTCCGCGCCGCCGCCAAGGTGGCCCTGGACTACCTGC > NC_002947/4144974‑4145120 CCTGGTGGGCCACCAGCGGGTCGCCGCCCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCC < 2:34907/149‑1CCTGGTGGGCCACCAGCGGGTCGCCGCCCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCC < 3:243387/149‑1 TGGTGGGCCACCAGCGGGTCGCCGCCCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGC > 6:273531/1‑149 TGGTGGGCCACCAGCGGGTCGCCG‑CCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGC > 6:357353/1‑148 GGTGGGCCACCAGCGGGTCGCCGCCCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGC > 3:9851/1‑148 GTGGGCCACCAGCGGGTCGCCGCCCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGCGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCA > 6:297776/1‑149 GAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCACCTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACC > 5:236582/1‑139 GAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCACCTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACC < 6:236582/139‑1 GTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCACCTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCA > 5:234704/1‑149 GCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCACCTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCACCA < 6:234704/149‑1 CGCCACCTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCACCAGGCCTCGGTCGACCACGT < 3:298312/120‑1 CGCCACCTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCACCAGGCCTCGGTCGACCACGT > 4:298312/1‑120 CCTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCACCAGGCCTCGGTCGACCACGTCCGCGCCGCCGCCAAGGTGGCCCTGGACTACCTG < 7:354479/149‑1 CTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCACCAGGCCTCGGTCGACCACGTCCGCGCCGCCGCCAAGGTGGCCCTGGACTACCTGC < 1:244961/149‑1 CTCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCACCAGGCCTCGGTCGACCACGTCCGCGCCGCCGCCAAGGTGGCCCTGGACTACCTGC < 6:346344/149‑1 CCTGGTGGGCCACCAGCGGGTCGCCGCCCTTGATGGCCTCGACGATCTTTTCCATTTCGCGGTTGCTGGCGCCGCGGCGGTTTTCCTGCGATACCGAGGTGGCGCGCAGGTAGCTGATGCGTGCTTGCAACTGGCGCAGCTGCTGGGCCGCCACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4145069‑4144914‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccacctCGGTATCGCAGGAAAACCGCCGCGGCGCCAGCAACCGCGAAATGGAAAAGATCGTCGAGGCCATCAAGGGCGGCGACCCGCTGGTGGCCCACCAGGCCTCGGTCGACCACGTCCGCGCCGCCGCCAAGGTGGCCCTGGACTACCTGC > NC_002947/4144974‑4145120 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |