New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4249166	42 (0.700)	3 (0.050)	3/254	NT	6.4%	coding (861/2118 nt)	PP_3724	acyl‑CoA synthetase
	?	NC_002947	= 4249191	47 (0.820)					coding (836/2118 nt)	PP_3724	acyl‑CoA synthetase

TCGGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4249017‑4249166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAGCTCGA  <  NC_002947/4249191‑4249044                                                                                                                                                                                                                                                                                                            TCGGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGC                                                                                                                                                       >  1:307078/1‑149  CGGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGCC                                                                                                                                                      >  2:195946/1‑149   GGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGC                                                                                                                                                       <  7:48943/147‑1                                    cggttGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGCCCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGC                                                                                                                    <  1:134435/144‑1                                                                        AATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGCCCGGTGAGCTTTGTCGAAACGCTCAAGG                                                                                                                           <  3:231151/106‑1                                                                        AATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGCCCGGTGAGCTTTGTCGAAACGCTCAAGG                                                                                                                           >  4:231151/1‑106                                                                                                                                                  CGGCCCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAGC      >  4:341362/1‑149                                                                                                                                                   GGCCCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAGCT     >  8:233494/1‑149                                                                                                                                                    GCCCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAGCTC    <  3:22563/149‑1                                                                                                                                                      CCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAGCTCGA  <  1:202593/149‑1                                                                                                                                                      CCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAGCTCGA  <  3:239424/149‑1                                                                                                                                                                                                                                                                                                            TCGGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4249017‑4249166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAGCTCGA  <  NC_002947/4249191‑4249044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.