New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4668359 =	66 (1.100)	6 (0.110)	5/250	NT	9.3%	coding (231/1533 nt)	nuoM	NADH‑quinone oxidoreductase subunit M
	?	NC_002947	4668402 =	55 (0.970)					coding (274/1533 nt)	nuoM	NADH‑quinone oxidoreductase subunit M

CCACGCCGCCGAGGATCCACATCAGGTTGAGGTGGAAGAAGCCGACGTGGCGCTGGATCTCTTTCCAGGAACACAGTACCGACAGCACACCGAGCAGGCCGGTGAGCAGGATCATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4668513‑4668359 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgatgATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGGTGTGTTCCTGGCCCTGGACCTGTTCCTGT  >  NC_002947/4668402‑4668546                                                                                                                                                                                                                                                                                                              CCACGCCGCCGAGGATCCACATCAGGTTGAGGTGGAAGAAGCCGACGTGGCGCTGGATCTCTTTCCAGGAACACAGTACCGACAGCACACCGAGCAGGCCGGTGAGCAGGATCATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATG                                                                                                                                                         <  5:56365/149‑1    CGCCGCCGAGGATCCACATCAGGTTGAGGTGGAAGAAGCCGACGTGGCGCTGGATCTCTTTCCAGGAACACAGTACCGACAGCACACCGAGCAGGCCGGTGAGCAGGATCATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTG                                                                                                                                                      <  5:246052/149‑1           GAGGATCCACATCAGGTTGAGGTGGAAGAAGCCGACGTGGCGCTGGATCTCTTTCCAGGAACACAGTACCGACAGCACACCGAGCAGGCCGGTGAGCAGGATCATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATG                                                                                                                                                         >  7:131566/1‑139           GAGGATCCACATCAGGTTGAGGTGGAAGAAGCCGACGTGGCGCTGGATCTCTTTCCAGGAACACAGTACCGACAGCACACCGAGCAGGCCGGTGAGCAGGATCATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATG                                                                                                                                                         <  8:131566/139‑1                                                                                                                TCATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGC                                          >  1:168158/1‑149                                                                                                                 aATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGtg                                         <  1:202583/148‑3                                                                                                                  ATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGG                                        >  7:22521/1‑149                                                                                                                   TCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCT                                                                       <  5:172124/117‑1                                                                                                                   TCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCT                                                                       >  6:172124/1‑117                                                                                                                         GCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTC                                 <  2:168158/149‑1                                                                                                                                                       TGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGGTGTGTTCCTGGCCCTGGACCTGTTCCTG   >  4:177734/1‑149                                                                                                                                                        GATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGGTGTGTTCCTGGCCCTGGACCTGTTCCTGT  >  4:254992/1‑149                                                                                                                                                         ATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGGTGTGTTCCTGGCCCTGGACCTGTTCCTG   <  6:184748/147‑1                                                                                                                                                         ATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGGTGTGTTCCTGGCCCTGGACCTGTTCCTG   <  8:22521/147‑1                                                                                                                                                                                                                                                                                                              CCACGCCGCCGAGGATCCACATCAGGTTGAGGTGGAAGAAGCCGACGTGGCGCTGGATCTCTTTCCAGGAACACAGTACCGACAGCACACCGAGCAGGCCGGTGAGCAGGATCATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4668513‑4668359 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgatgATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGGTGTGTTCCTGGCCCTGGACCTGTTCCTGT  >  NC_002947/4668402‑4668546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.