New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 474353365 (1.080)4 (0.070) 4/252 NT 5.7% coding (459/1593 nt) PP_4197 GntR family transcriptional regulator
?NC_002947 = 4743559 72 (1.260)coding (433/1593 nt) PP_4197 GntR family transcriptional regulator

CAGCGGCTCGAAACCGGGGCTGAACATGTAACTGAAGGCGCGCGGGCTATGAAAGCGCGTCACCTTGGCGATTTGCTGATGCAGGGCGCGCACTGGCAGGTAGTCGACATGCGGCACAGCAGCACCAAACGGGAACACACCATCGCGGCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4743380‑4743533
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccAGCATCATCCAGCAGGTGCTGACTGAGGCGCGCCGCGATGGTGTGTTCCCGTTTGGTGCTGCTGTGCCGCATGTCGACTACCTGCCAGTGCGCGCCCTGCATCAGCAAATCGCCAAGGTGACGCGCTTTCATAGCCCGCGCGCCTTCA  <  NC_002947/4743559‑4743412
                                                                                                                                                                                                                                                                                                              
CAGCGGCTCGAAACCGGGGCTGAACATGTAACTGAAGGCGCGCGGGCTATGAAAGCGCGTCACCTTGGCGATTTGCTGATGCAGGGCGCGCACTGGCAGGTAGTCGACATGCGGCACAGCAGCACCAAACGGGAACACACCATCGCGGC                                                                                                                                                           <  4:303514/149‑1
 AGCGGCTCGAAACCGGGGCTGAACATGTAACTGAAGGCGCGCGGGCTATGAAAGCGCGTCACCTTGGCGATTTGCTGATGCAGGGCGCGCACTGGCAGGTAGTCGACATGCGGCACAGCAGCACCAAACGGGAACACACCATCGCGGCG                                                                                                                                                          >  3:5418/1‑149
     GCTCGAAACCGGGGCTGAACATGTAACTGAAGGCGCGCGGGCTATGAAAGCGCGTCACCTTGGCGATTTGCTGATGCAGGGCGCGCACTGGCAGGTAGTCGACATGCGGCACAGCAGCACCAAACGGGAACACACCATCGCGGCGCGCC                                                                                                                                                      >  3:128432/1‑149
                          TGTAACTGAAGGCGCGCGGGCTATGAAAGCGCGTCACCTTGGCGATTTGCTGATGCAGGGCGCGCACTGGCAGGTAGTCGACATGCGGCACAGCAGCACCAAACGGGAACACACCATCGCGGCGCGC                                                                                                                                                       >  7:280448/1‑127
                          TGTAACTGAAGGCGCGCGGGCTATGAAAGCGCGTCACCTTGGCGATTTGCTGATGCAGGGCGCGCACTGGCAGGTAGTCGACATGCGGCACAGCAGCACCAAACGGGAACACACCATCGCGGCGCGC                                                                                                                                                       <  8:280448/127‑1
                                  AAGGCGCGCGGGCTATGAAAGCGCGTCACCTTGGCGATTTGCTGATGCAGGGCGCGCACTGGCAGGTAGTCGACATGCGGCACAGCAGCACCAAACGGGAACACACCATCGCGGCGCGCCAGCATCATCCAGCAGGTGCTGACTGAGGC                                                                                                                         >  7:225747/1‑149
                                    GGCGCGCGGGCTATGAAAGCGCGTCACCTTGGCGATTTGCTGATGCAGGGCGCGCACTGGCAGGTAGTCGACATGCGGCACAGCAGCACCAAACGGGAACACACCATCGCGGCGCGCCAGCATCATCCAGCAGGTGCTGACTGAGGCGC                                                                                                                       <  6:322957/149‑1
                                     GCGCGCGGGCTATGAAAGCGCGTCACCTTGGCGATTTGCTGATGCAGGGCGCGCACTGGCAGGTAGTCGACATGCGGCACAGCAGCACCAAACGGGAACACACCATCGCGGCGCGCCAGCATCATCCAGCAGGTGCTGACTGAGGCGCG                                                                                                                      <  8:225747/149‑1
                                          CGGGCTATGAAAGCGCGTCACCTTGGCGATTTGCTGATGCAGGGCGCGCACTGGCAGGTAGTCGACATGCGGCACAGCAGCACCAAACGGGAACACACCATCGCGGCGCGCCAGCATCATCCAGCAGTTGCTGACTGAGGCGCGCCGCG                                                                                                                 <  6:120686/149‑1
                                                                                                                                                    CGCGCCAGCATCATCCAGCAGGTGCTGACTGAGGCGCGCCGCGATGGTGTGTTCCCGTTTGGTGCTGCTGTGCCGCATGTCGACTACCTGCCAGTGCGCGCCCTGCATCAGCAAATCGCCAAGGTGACGCGCTTT                     <  1:266536/135‑1
                                                                                                                                                    CGCGCCAGCATCATCCAGCAGGTGCTGACTGAGGCGCGCCGCGATGGTGTGTTCCCGTTTGGTGCTGCTGTGCCGCATGTCGACTACCTGCCAGTGCGCGCCCTGCATCAGCAAATCGCCAAGGTGACGCGCTTT                     >  2:266536/1‑135
                                                                                                                                                         CAGCATCATCCAGCAGGTGCTGACTGAGGCGCGCCGCGATGGTGTGTTCCCGTTTGGTGCTGCTGTGCCGCATGTCGACTACCTGCCAGTGCGCGCCCTGCATCAGCAAATCGCCAAGGTGACGCGCTTTCATAGCCCGCGCGCCTTCA  <  1:156719/149‑1
                                                                                                                                                         CAGCATCATCCAGCAGGTGCTGACTGAGGCGCGCCGCGATGGTGTGTTCCCGTTTGGTGCTGCTGTGCCGCATGTCGACTACCTGCCAGTGCGCGCCCTGCATCAGCAAATCGCCAAGGTGACGCGCTTTCATAGCCCGCGCGCCTTCA  <  2:375667/149‑1
                                                                                                                                                                                                                                                                                                              
CAGCGGCTCGAAACCGGGGCTGAACATGTAACTGAAGGCGCGCGGGCTATGAAAGCGCGTCACCTTGGCGATTTGCTGATGCAGGGCGCGCACTGGCAGGTAGTCGACATGCGGCACAGCAGCACCAAACGGGAACACACCATCGCGGCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4743380‑4743533
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccAGCATCATCCAGCAGGTGCTGACTGAGGCGCGCCGCGATGGTGTGTTCCCGTTTGGTGCTGCTGTGCCGCATGTCGACTACCTGCCAGTGCGCGCCCTGCATCAGCAAATCGCCAAGGTGACGCGCTTTCATAGCCCGCGCGCCTTCA  <  NC_002947/4743559‑4743412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.