New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5055940 =	60 (1.000)	4 (0.070)	4/254	NT	6.7%	coding (387/942 nt)	gsiC	glutathione ABC transporter permease
	?	NC_002947	5055976 =	54 (0.940)					coding (351/942 nt)	gsiC	glutathione ABC transporter permease

GTCTCAATGACCAGCGGCAGAACTGTGCTGCAGGAGGTATCCCTGGTTCTACCGTGGACGCTGCAATTGACGTTTGCATCCGTGTTGATCGGCCTCGTGTTCGGTCTGCCCCTTGGTGTCTGGGCGGCGCTTCGTCGCAACGCCTGGCCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5056092‑5055940 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagacACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGGGATACCTCCTGCAGCACAGTTCTGCCGCTGGTCATTGAGAC  >  NC_002947/5055976‑5056092                                                                                                                                                                                                                                                                                GTCTCAATGACCAGCGGCAGAACTGTGCTGCAGGAGGTATCCCTGGTTCTACCGTGGACGCTGCAATTGACGTTTGCATCCGTGTTGATCGGCCTCGTGTTCGGTCTGCCCCTTGGTGTCTGGGCGGCGCTTCGTCGCAACGCCTGGCC                                                                                                                           <  3:228527/149‑1  TCTCAATGACCAGCGGCAGAACTGTGCTGCAGGAGGTATCCCTGGTTCTACCGTGGACGCTGCAATTGACGTTTGCATCCGTGTTGATCGGCCTCGTGTTCGGTCTGCCCCTTGGTGTCTGGGCGGCGCTTCGTCGCAACGCCTGGCCA                                                                                                                          <  3:98940/149‑1      AATGACCAGCTGCAGAACTGTGCTGCAGGAGGTATCCCTGGTTCTACCGTGGACGCTGCAATTGACGTTTGCATCCGTGTTGATCGGCCTCGTGTTCGGTCTGCCCCTTGGTGTCTGGGCGGCGCTTCGTCGCATCGCCTGGCCAGAC                                                                                                                       <  3:201642/148‑1      AATGACCAGCGGCAGAACTGTGCTGCAGGAGGTATCCCTGGTTCTACCGTGGACGCTGCAATTGACGTTTGCATCCGTGTTGATCGGCCTCGTGTTCGGTCTGCCCCTTGGTGTCTGGGCGGCGCTTCGTCGCAACGCCTGGCCAGA                                                                                                                        <  1:124148/147‑1                                                                                                               CCTTGGTGTCTGGGCGGCGCTTCGTCGCAACGCCTGGCCAGACACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGGGATACCTCCTGCAGCACAGTTCTGCCGCTG             >  2:12082/1‑149                                                                                                                CTTGGTGTCTGGGCGGCGCTTCGTCGCAACGCCTGGCCAGACACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGGGATACCTCCTGCAGCACAGTTCTGCCGCTGG            >  1:50100/1‑149                                                                                                                    GTGTCTGGGCGGCGCTTCGTCGCAACGCCTGGCCAGACACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGGGATACCTCCTGCAGCACAGTTCTGCCGCTGGTCAT        >  2:136117/1‑149                                                                                                                           GGCGGCGCTTCGTCGCAACGCCTGGCCAGACACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGGGATACCTCCTGCAGCACAGTTCTGCCGCTGGTCATTGAGAC  <  1:136117/148‑1                                                                                                                                                                                                                                                                                GTCTCAATGACCAGCGGCAGAACTGTGCTGCAGGAGGTATCCCTGGTTCTACCGTGGACGCTGCAATTGACGTTTGCATCCGTGTTGATCGGCCTCGTGTTCGGTCTGCCCCTTGGTGTCTGGGCGGCGCTTCGTCGCAACGCCTGGCCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5056092‑5055940 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagacACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGGGATACCTCCTGCAGCACAGTTCTGCCGCTGGTCATTGAGAC  >  NC_002947/5055976‑5056092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.